Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tnrc18Q80WC3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Tnrc18Q80WC3 Gm7332-201ENSMUST00000118351 454 ntBASIC24.52■■□□□ 1.52
Tnrc18Q80WC3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnrc18Q80WC3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.52■■□□□ 1.52
Tnrc18Q80WC3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnrc18Q80WC3 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.51■■□□□ 1.51
Tnrc18Q80WC3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnrc18Q80WC3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tnrc18Q80WC3 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.49■■□□□ 1.51
Tnrc18Q80WC3 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.48■■□□□ 1.51
Tnrc18Q80WC3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tnrc18Q80WC3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tnrc18Q80WC3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Tnrc18Q80WC3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tnrc18Q80WC3 Gm14523-201ENSMUST00000117260 558 ntBASIC24.44■■□□□ 1.5
Tnrc18Q80WC3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.43■■□□□ 1.5
Tnrc18Q80WC3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tnrc18Q80WC3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnrc18Q80WC3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnrc18Q80WC3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnrc18Q80WC3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Tnrc18Q80WC3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Tnrc18Q80WC3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tnrc18Q80WC3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Tnrc18Q80WC3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tnrc18Q80WC3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tnrc18Q80WC3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.39■■□□□ 1.49
Tnrc18Q80WC3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tnrc18Q80WC3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tnrc18Q80WC3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tnrc18Q80WC3 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.36■■□□□ 1.49
Tnrc18Q80WC3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tnrc18Q80WC3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.35■■□□□ 1.49
Tnrc18Q80WC3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Tnrc18Q80WC3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Tnrc18Q80WC3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Tnrc18Q80WC3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Tnrc18Q80WC3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Tnrc18Q80WC3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Tnrc18Q80WC3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tnrc18Q80WC3 Gm27502-201ENSMUST00000183495 199 ntBASIC24.32■■□□□ 1.48
Tnrc18Q80WC3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Tnrc18Q80WC3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tnrc18Q80WC3 Mir3960-201ENSMUST00000198213 73 ntBASIC24.3■■□□□ 1.48
Tnrc18Q80WC3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tnrc18Q80WC3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tnrc18Q80WC3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tnrc18Q80WC3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Tnrc18Q80WC3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.28■■□□□ 1.48
Tnrc18Q80WC3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.27■■□□□ 1.48
Tnrc18Q80WC3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Tnrc18Q80WC3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.27■■□□□ 1.48
Tnrc18Q80WC3 Gm5921-201ENSMUST00000075898 882 ntBASIC24.26■■□□□ 1.47
Tnrc18Q80WC3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tnrc18Q80WC3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Tnrc18Q80WC3 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.25■■□□□ 1.47
Tnrc18Q80WC3 Gm10420-201ENSMUST00000121713 882 ntBASIC24.25■■□□□ 1.47
Tnrc18Q80WC3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tnrc18Q80WC3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.24■■□□□ 1.47
Tnrc18Q80WC3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnrc18Q80WC3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnrc18Q80WC3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnrc18Q80WC3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tnrc18Q80WC3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.23■■□□□ 1.47
Tnrc18Q80WC3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.23■■□□□ 1.47
Tnrc18Q80WC3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Tnrc18Q80WC3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Tnrc18Q80WC3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tnrc18Q80WC3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
Tnrc18Q80WC3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Tnrc18Q80WC3 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.2■■□□□ 1.46
Tnrc18Q80WC3 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.19■■□□□ 1.46
Tnrc18Q80WC3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tnrc18Q80WC3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tnrc18Q80WC3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Tnrc18Q80WC3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms