Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 BUD31YCR063W 474 nt8.45□□□□□ -1.06
VTI1Q04338 ECM10YEL030W 1935 nt8.44□□□□□ -1.06
VTI1Q04338 ECM27YJR106W 2178 nt8.44□□□□□ -1.06
VTI1Q04338 STF1YDL130W-A 261 nt8.43□□□□□ -1.06
VTI1Q04338 GLY1YEL046C 1164 nt8.43□□□□□ -1.06
VTI1Q04338 PAU15YIR041W 375 nt8.43□□□□□ -1.06
VTI1Q04338 RAD51YER095W 1203 nt8.42□□□□□ -1.06
VTI1Q04338 INM1YHR046C 888 nt8.42□□□□□ -1.06
VTI1Q04338 YLR460CYLR460C 1131 nt8.42□□□□□ -1.06
VTI1Q04338 TGL5YOR081C 2250 nt8.42□□□□□ -1.06
VTI1Q04338 PGC1YPL206C 966 nt8.41□□□□□ -1.06
VTI1Q04338 LRO1YNR008W 1986 nt8.41□□□□□ -1.06
VTI1Q04338 EHT1YBR177C 1356 nt8.4□□□□□ -1.06
VTI1Q04338 PMT7YDR307W 1989 nt8.39□□□□□ -1.07
VTI1Q04338 DIP5YPL265W 1827 nt8.39□□□□□ -1.07
VTI1Q04338 TDA4YJR116W 840 nt8.39□□□□□ -1.07
VTI1Q04338 STP3YLR375W 1032 nt8.39□□□□□ -1.07
VTI1Q04338 RNA170RNA170 169 nt8.39□□□□□ -1.07
VTI1Q04338 YLR280CYLR280C 351 nt8.38□□□□□ -1.07
VTI1Q04338 YHR131CYHR131C 2553 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)DtA(AGC)D 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)FtA(AGC)F 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)GtA(AGC)G 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)HtA(AGC)H 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)JtA(AGC)J 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)K1tA(AGC)K1 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)K2tA(AGC)K2 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)LtA(AGC)L 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)M1tA(AGC)M1 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)M2tA(AGC)M2 73 nt8.37□□□□□ -1.07
VTI1Q04338 tA(AGC)PtA(AGC)P 73 nt8.37□□□□□ -1.07
VTI1Q04338 FLX1YIL134W 936 nt8.37□□□□□ -1.07
VTI1Q04338 MET22YOL064C 1074 nt8.37□□□□□ -1.07
VTI1Q04338 OLA1YBR025C 1185 nt8.37□□□□□ -1.07
VTI1Q04338 YIL177CYIL177C 5277 nt8.37□□□□□ -1.07
VTI1Q04338 ADE5,7YGL234W 2409 nt8.37□□□□□ -1.07
VTI1Q04338 GUT1YHL032C 2130 nt8.36□□□□□ -1.07
VTI1Q04338 SLM3YDL033C 1254 nt8.36□□□□□ -1.07
VTI1Q04338 CHS7YHR142W 951 nt8.36□□□□□ -1.07
VTI1Q04338 MRP7YNL005C 1116 nt8.36□□□□□ -1.07
VTI1Q04338 WSC4YHL028W 1818 nt8.35□□□□□ -1.07
VTI1Q04338 IPL1YPL209C 1104 nt8.34□□□□□ -1.07
VTI1Q04338 KTR4YBR199W 1395 nt8.34□□□□□ -1.07
VTI1Q04338 ARO3YDR035W 1113 nt8.33□□□□□ -1.08
VTI1Q04338 CYC3YAL039C 810 nt8.33□□□□□ -1.08
VTI1Q04338 YRF1-3YGR296W 5580 nt8.32□□□□□ -1.08
VTI1Q04338 YRF1-6YNL339C 5580 nt8.32□□□□□ -1.08
VTI1Q04338 YRF1-7YPL283C 5580 nt8.32□□□□□ -1.08
VTI1Q04338 RCF1YML030W 480 nt8.32□□□□□ -1.08
VTI1Q04338 LPD1YFL018C 1500 nt8.32□□□□□ -1.08
VTI1Q04338 MET13YGL125W 1803 nt8.31□□□□□ -1.08
VTI1Q04338 RPL2AYFR031C-A 765 nt8.31□□□□□ -1.08
VTI1Q04338 tS(GCU)LtS(GCU)L 80 nt8.31□□□□□ -1.08
VTI1Q04338 SRP102YKL154W 735 nt8.31□□□□□ -1.08
VTI1Q04338 YRF1-1YDR545W 5391 nt8.31□□□□□ -1.08
VTI1Q04338 YRF1-5YLR467W 5391 nt8.31□□□□□ -1.08
VTI1Q04338 YRF1-8YOR396W 5391 nt8.31□□□□□ -1.08
VTI1Q04338 PDC6YGR087C 1692 nt8.3□□□□□ -1.08
VTI1Q04338 ALG7YBR243C 1347 nt8.3□□□□□ -1.08
VTI1Q04338 RHO1YPR165W 630 nt8.3□□□□□ -1.08
VTI1Q04338 ERO1YML130C 1692 nt8.3□□□□□ -1.08
VTI1Q04338 WSC3YOL105C 1671 nt8.3□□□□□ -1.08
VTI1Q04338 YEL034C-AYEL034C-A 603 nt8.29□□□□□ -1.08
VTI1Q04338 YBR232CYBR232C 360 nt8.29□□□□□ -1.08
VTI1Q04338 OCH1YGL038C 1443 nt8.29□□□□□ -1.08
VTI1Q04338 YGR137WYGR137W 375 nt8.28□□□□□ -1.08
VTI1Q04338 YPL264CYPL264C 1062 nt8.28□□□□□ -1.08
VTI1Q04338 THI73YLR004C 1572 nt8.27□□□□□ -1.09
VTI1Q04338 SHC1YER096W 1539 nt8.27□□□□□ -1.09
VTI1Q04338 ELP6YMR312W 822 nt8.26□□□□□ -1.09
VTI1Q04338 MTC6YHR151C 1581 nt8.26□□□□□ -1.09
VTI1Q04338 HXT8YJL214W 1710 nt8.25□□□□□ -1.09
VTI1Q04338 PUP3YER094C 618 nt8.24□□□□□ -1.09
VTI1Q04338 CAK1YFL029C 1107 nt8.24□□□□□ -1.09
VTI1Q04338 YHL030W-AYHL030W-A 462 nt8.24□□□□□ -1.09
VTI1Q04338 AIM34YMR003W 597 nt8.24□□□□□ -1.09
VTI1Q04338 SGF73YGL066W 1974 nt8.24□□□□□ -1.09
VTI1Q04338 PMT1YDL095W 2454 nt8.23□□□□□ -1.09
VTI1Q04338 YCR025CYCR025C 411 nt8.23□□□□□ -1.09
VTI1Q04338 SNP1YIL061C 903 nt8.23□□□□□ -1.09
VTI1Q04338 YMR166CYMR166C 1107 nt8.22□□□□□ -1.09
VTI1Q04338 TPO1YLL028W 1761 nt8.22□□□□□ -1.09
VTI1Q04338 AVL9YLR114C 2295 nt8.22□□□□□ -1.09
VTI1Q04338 RRT6YGL146C 936 nt8.21□□□□□ -1.1
VTI1Q04338 YJR154WYJR154W 1041 nt8.21□□□□□ -1.1
VTI1Q04338 PRC1YMR297W 1599 nt8.21□□□□□ -1.1
VTI1Q04338 CBK1YNL161W 2271 nt8.2□□□□□ -1.1
VTI1Q04338 HXT9YJL219W 1704 nt8.2□□□□□ -1.1
VTI1Q04338 RSC9YML127W 1746 nt8.2□□□□□ -1.1
VTI1Q04338 CKB1YGL019W 837 nt8.2□□□□□ -1.1
VTI1Q04338 SER2YGR208W 930 nt8.2□□□□□ -1.1
VTI1Q04338 MET30YIL046W 1923 nt8.2□□□□□ -1.1
VTI1Q04338 UBP13YBL067C 2244 nt8.19□□□□□ -1.1
VTI1Q04338 TGA1tA(UGC)A 73 nt8.19□□□□□ -1.1
VTI1Q04338 tA(UGC)EtA(UGC)E 73 nt8.19□□□□□ -1.1
VTI1Q04338 tA(UGC)GtA(UGC)G 73 nt8.19□□□□□ -1.1
VTI1Q04338 tA(UGC)LtA(UGC)L 73 nt8.19□□□□□ -1.1
VTI1Q04338 tA(UGC)OtA(UGC)O 73 nt8.19□□□□□ -1.1
VTI1Q04338 YGR210CYGR210C 1236 nt8.19□□□□□ -1.1
VTI1Q04338 LSP1YPL004C 1026 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 81.9 ms