Protein–RNA interactions for Protein: P84078

Arf1, ADP-ribosylation factor 1, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arf1P84078 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Arf1P84078 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.83■□□□□ 0.93
Arf1P84078 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Arf1P84078 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Arf1P84078 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Arf1P84078 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Arf1P84078 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Arf1P84078 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Arf1P84078 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Arf1P84078 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Arf1P84078 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Arf1P84078 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.8■□□□□ 0.92
Arf1P84078 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.8■□□□□ 0.92
Arf1P84078 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Arf1P84078 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Arf1P84078 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Arf1P84078 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.79■□□□□ 0.92
Arf1P84078 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Arf1P84078 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Arf1P84078 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.79■□□□□ 0.92
Arf1P84078 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Arf1P84078 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Arf1P84078 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Arf1P84078 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Arf1P84078 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Arf1P84078 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.78■□□□□ 0.92
Arf1P84078 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Arf1P84078 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Arf1P84078 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Arf1P84078 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.77■□□□□ 0.92
Arf1P84078 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Arf1P84078 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Arf1P84078 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Arf1P84078 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Arf1P84078 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Arf1P84078 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Arf1P84078 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Arf1P84078 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Arf1P84078 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Arf1P84078 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Arf1P84078 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
Arf1P84078 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.72■□□□□ 0.91
Arf1P84078 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Arf1P84078 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Arf1P84078 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Arf1P84078 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.71■□□□□ 0.91
Arf1P84078 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Arf1P84078 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Arf1P84078 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Arf1P84078 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Arf1P84078 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Arf1P84078 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Arf1P84078 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Arf1P84078 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.67■□□□□ 0.9
Arf1P84078 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.67■□□□□ 0.9
Arf1P84078 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Arf1P84078 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Arf1P84078 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Arf1P84078 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Arf1P84078 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Arf1P84078 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Arf1P84078 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Arf1P84078 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Arf1P84078 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Arf1P84078 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Arf1P84078 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Arf1P84078 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Arf1P84078 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Arf1P84078 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Arf1P84078 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Arf1P84078 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Arf1P84078 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Arf1P84078 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Arf1P84078 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Arf1P84078 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Arf1P84078 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Arf1P84078 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Arf1P84078 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.58■□□□□ 0.89
Arf1P84078 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Arf1P84078 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Arf1P84078 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Arf1P84078 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Arf1P84078 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Arf1P84078 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Arf1P84078 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Arf1P84078 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Arf1P84078 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Arf1P84078 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.55■□□□□ 0.88
Arf1P84078 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Arf1P84078 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Arf1P84078 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Arf1P84078 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Arf1P84078 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Arf1P84078 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.53■□□□□ 0.88
Arf1P84078 Gm7432-201ENSMUST00000210343 879 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms