Protein–RNA interactions for Protein: P53941

IMP4, U3 small nucleolar ribonucleoprotein protein IMP4, yeastyeast

Known RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IMP4P53941 tD(GUC)G1tD(GUC)G1 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)G2tD(GUC)G2 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)I1tD(GUC)I1 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)I2tD(GUC)I2 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)J1tD(GUC)J1 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)J2tD(GUC)J2 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)J3tD(GUC)J3 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)J4tD(GUC)J4 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)KtD(GUC)K 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)L1tD(GUC)L1 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)L2tD(GUC)L2 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)MtD(GUC)M 72 nt8.17□□□□□ -1.1
IMP4P53941 tD(GUC)OtD(GUC)O 72 nt8.17□□□□□ -1.1
IMP4P53941 CAK1YFL029C 1107 nt8.17□□□□□ -1.1
IMP4P53941 CHS7YHR142W 951 nt8.17□□□□□ -1.1
IMP4P53941 PTC6YCR079W 1329 nt8.15□□□□□ -1.1
IMP4P53941 PET494YNR045W 1470 nt8.14□□□□□ -1.11
IMP4P53941 UTR5YEL035C 501 nt8.14□□□□□ -1.11
IMP4P53941 SBP1YHL034C 885 nt8.14□□□□□ -1.11
IMP4P53941 ADE1YAR015W 921 nt8.14□□□□□ -1.11
IMP4P53941 YRF1-3YGR296W 5580 nt8.14□□□□□ -1.11
IMP4P53941 YRF1-6YNL339C 5580 nt8.14□□□□□ -1.11
IMP4P53941 YRF1-7YPL283C 5580 nt8.14□□□□□ -1.11
IMP4P53941 OCH1YGL038C 1443 nt8.13□□□□□ -1.11
IMP4P53941 YJL043WYJL043W 774 nt8.13□□□□□ -1.11
IMP4P53941 OLA1YBR025C 1185 nt8.13□□□□□ -1.11
IMP4P53941 KRR1YCL059C 951 nt8.12□□□□□ -1.11
IMP4P53941 TDH1YJL052W 999 nt8.12□□□□□ -1.11
IMP4P53941 YPL247CYPL247C 1572 nt8.12□□□□□ -1.11
IMP4P53941 HBS1YKR084C 1836 nt8.12□□□□□ -1.11
IMP4P53941 SNX3YOR357C 489 nt8.11□□□□□ -1.11
IMP4P53941 TOM71YHR117W 1920 nt8.11□□□□□ -1.11
IMP4P53941 KGD2YDR148C 1392 nt8.1□□□□□ -1.11
IMP4P53941 YHR219WYHR219W 1875 nt8.1□□□□□ -1.11
IMP4P53941 INH1YDL181W 258 nt8.09□□□□□ -1.11
IMP4P53941 YJR149WYJR149W 1215 nt8.09□□□□□ -1.11
IMP4P53941 NUP53YMR153W 1428 nt8.09□□□□□ -1.11
IMP4P53941 RPD3YNL330C 1302 nt8.08□□□□□ -1.12
IMP4P53941 MET22YOL064C 1074 nt8.08□□□□□ -1.12
IMP4P53941 YDR476CYDR476C 675 nt8.07□□□□□ -1.12
IMP4P53941 YPT31YER031C 672 nt8.07□□□□□ -1.12
IMP4P53941 ATP2YJR121W 1536 nt8.06□□□□□ -1.12
IMP4P53941 PDC6YGR087C 1692 nt8.05□□□□□ -1.12
IMP4P53941 BXI1YNL305C 894 nt8.05□□□□□ -1.12
IMP4P53941 RPS6AYPL090C 711 nt8.05□□□□□ -1.12
IMP4P53941 RPS6BYBR181C 711 nt8.05□□□□□ -1.12
IMP4P53941 MET30YIL046W 1923 nt8.03□□□□□ -1.12
IMP4P53941 YIR035CYIR035C 765 nt8.02□□□□□ -1.13
IMP4P53941 YBL095WYBL095W 813 nt8□□□□□ -1.13
IMP4P53941 ORT1YOR130C 879 nt8□□□□□ -1.13
IMP4P53941 DUR3YHL016C 2208 nt8□□□□□ -1.13
IMP4P53941 DUS3YLR401C 2007 nt7.99□□□□□ -1.13
IMP4P53941 RPR1RPR1 369 nt7.99□□□□□ -1.13
IMP4P53941 ADE16YLR028C 1776 nt7.98□□□□□ -1.13
IMP4P53941 COS10YNR075W 1125 nt7.98□□□□□ -1.13
IMP4P53941 FET5YFL041W 1869 nt7.97□□□□□ -1.13
IMP4P53941 GGA2YHR108W 1758 nt7.97□□□□□ -1.13
IMP4P53941 PMU1YKL128C 888 nt7.96□□□□□ -1.14
IMP4P53941 YNL190WYNL190W 615 nt7.96□□□□□ -1.14
IMP4P53941 snR4snR4 186 nt7.96□□□□□ -1.14
IMP4P53941 YIL177CYIL177C 5277 nt7.95□□□□□ -1.14
IMP4P53941 HEM14YER014W 1620 nt7.94□□□□□ -1.14
IMP4P53941 RPC31YNL151C 756 nt7.94□□□□□ -1.14
IMP4P53941 YIL168WYIL168W 384 nt7.93□□□□□ -1.14
IMP4P53941 RNA170RNA170 169 nt7.93□□□□□ -1.14
IMP4P53941 PSP2YML017W 1782 nt7.92□□□□□ -1.14
IMP4P53941 ALR1YOL130W 2580 nt7.92□□□□□ -1.14
IMP4P53941 YLR358CYLR358C 564 nt7.91□□□□□ -1.14
IMP4P53941 YMR316C-BYMR316C-B 309 nt7.91□□□□□ -1.14
IMP4P53941 RHO1YPR165W 630 nt7.91□□□□□ -1.14
IMP4P53941 YRF1-1YDR545W 5391 nt7.91□□□□□ -1.14
IMP4P53941 YRF1-5YLR467W 5391 nt7.91□□□□□ -1.14
IMP4P53941 YRF1-8YOR396W 5391 nt7.91□□□□□ -1.14
IMP4P53941 LEU4YNL104C 1860 nt7.9□□□□□ -1.14
IMP4P53941 RRT6YGL146C 936 nt7.9□□□□□ -1.14
IMP4P53941 YML079WYML079W 606 nt7.89□□□□□ -1.15
IMP4P53941 PFS2YNL317W 1398 nt7.88□□□□□ -1.15
IMP4P53941 PUP2YGR253C 783 nt7.88□□□□□ -1.15
IMP4P53941 FRA1YLL029W 2250 nt7.87□□□□□ -1.15
IMP4P53941 URA1YKL216W 945 nt7.87□□□□□ -1.15
IMP4P53941 BUB2YMR055C 921 nt7.87□□□□□ -1.15
IMP4P53941 NPP2YEL016C 1482 nt7.87□□□□□ -1.15
IMP4P53941 THI73YLR004C 1572 nt7.86□□□□□ -1.15
IMP4P53941 CPT1YNL130C 1182 nt7.86□□□□□ -1.15
IMP4P53941 NSG2YNL156C 900 nt7.86□□□□□ -1.15
IMP4P53941 TMS1YDR105C 1422 nt7.86□□□□□ -1.15
IMP4P53941 THI3YDL080C 1830 nt7.85□□□□□ -1.15
IMP4P53941 DPL1YDR294C 1770 nt7.85□□□□□ -1.15
IMP4P53941 PUP3YER094C 618 nt7.85□□□□□ -1.15
IMP4P53941 PRE10YOR362C 867 nt7.85□□□□□ -1.15
IMP4P53941 LAS17YOR181W 1902 nt7.85□□□□□ -1.15
IMP4P53941 TRP2YER090W 1524 nt7.84□□□□□ -1.15
IMP4P53941 GPM1YKL152C 744 nt7.84□□□□□ -1.15
IMP4P53941 LAT1YNL071W 1449 nt7.84□□□□□ -1.15
IMP4P53941 HSV2YGR223C 1347 nt7.83□□□□□ -1.16
IMP4P53941 HAC1YFL031W 717 nt7.83□□□□□ -1.16
IMP4P53941 AAC3YBR085W 924 nt7.83□□□□□ -1.16
IMP4P53941 YDR467CYDR467C 327 nt7.82□□□□□ -1.16
IMP4P53941 TIM50YPL063W 1431 nt7.82□□□□□ -1.16
IMP4P53941 SPR1YOR190W 1338 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 53 ms