Protein–RNA interactions for Protein: P53047

RTA1, Protein RTA1, yeastyeast

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTA1P53047 tD(GUC)I1tD(GUC)I1 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)I2tD(GUC)I2 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)J1tD(GUC)J1 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)J2tD(GUC)J2 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)J3tD(GUC)J3 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)J4tD(GUC)J4 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)KtD(GUC)K 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)L1tD(GUC)L1 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)L2tD(GUC)L2 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)MtD(GUC)M 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)OtD(GUC)O 72 nt8.34□□□□□ -1.07
RTA1P53047 YFR020WYFR020W 699 nt8.34□□□□□ -1.07
RTA1P53047 NPP1YCR026C 2229 nt8.33□□□□□ -1.08
RTA1P53047 YIR035CYIR035C 765 nt8.33□□□□□ -1.08
RTA1P53047 EEB1YPL095C 1371 nt8.33□□□□□ -1.08
RTA1P53047 HXT11YOL156W 1704 nt8.32□□□□□ -1.08
RTA1P53047 YCR025CYCR025C 411 nt8.32□□□□□ -1.08
RTA1P53047 snR86snR86 1004 nt8.32□□□□□ -1.08
RTA1P53047 HXK1YFR053C 1458 nt8.32□□□□□ -1.08
RTA1P53047 YJR149WYJR149W 1215 nt8.31□□□□□ -1.08
RTA1P53047 YLR460CYLR460C 1131 nt8.31□□□□□ -1.08
RTA1P53047 MIM1YOL026C 342 nt8.31□□□□□ -1.08
RTA1P53047 ALD5YER073W 1563 nt8.31□□□□□ -1.08
RTA1P53047 YJL064WYJL064W 396 nt8.3□□□□□ -1.08
RTA1P53047 YLR280CYLR280C 351 nt8.3□□□□□ -1.08
RTA1P53047 SRP102YKL154W 735 nt8.29□□□□□ -1.08
RTA1P53047 BUB2YMR055C 921 nt8.29□□□□□ -1.08
RTA1P53047 SWP1YMR149W 861 nt8.29□□□□□ -1.08
RTA1P53047 YPL277CYPL277C 1464 nt8.29□□□□□ -1.08
RTA1P53047 NAP1YKR048C 1254 nt8.28□□□□□ -1.08
RTA1P53047 YKR023WYKR023W 1593 nt8.27□□□□□ -1.09
RTA1P53047 YMR210WYMR210W 1350 nt8.26□□□□□ -1.09
RTA1P53047 PAU19YMR325W 375 nt8.26□□□□□ -1.09
RTA1P53047 ECM27YJR106W 2178 nt8.26□□□□□ -1.09
RTA1P53047 ERO1YML130C 1692 nt8.25□□□□□ -1.09
RTA1P53047 YBR056WYBR056W 1506 nt8.24□□□□□ -1.09
RTA1P53047 SRM1YGL097W 1449 nt8.24□□□□□ -1.09
RTA1P53047 CHS7YHR142W 951 nt8.24□□□□□ -1.09
RTA1P53047 ORT1YOR130C 879 nt8.24□□□□□ -1.09
RTA1P53047 OLA1YBR025C 1185 nt8.24□□□□□ -1.09
RTA1P53047 HBS1YKR084C 1836 nt8.24□□□□□ -1.09
RTA1P53047 YLR072WYLR072W 2082 nt8.23□□□□□ -1.09
RTA1P53047 LEA1YPL213W 717 nt8.23□□□□□ -1.09
RTA1P53047 MEP1YGR121C 1479 nt8.22□□□□□ -1.09
RTA1P53047 MAK32YCR019W 1092 nt8.22□□□□□ -1.09
RTA1P53047 SER2YGR208W 930 nt8.22□□□□□ -1.09
RTA1P53047 HMT1YBR034C 1047 nt8.22□□□□□ -1.09
RTA1P53047 UBP13YBL067C 2244 nt8.21□□□□□ -1.09
RTA1P53047 MEX67YPL169C 1800 nt8.21□□□□□ -1.1
RTA1P53047 HIS3YOR202W 663 nt8.2□□□□□ -1.1
RTA1P53047 HTS1YPR033C 1641 nt8.2□□□□□ -1.1
RTA1P53047 MET22YOL064C 1074 nt8.19□□□□□ -1.1
RTA1P53047 PZF1YPR186C 1290 nt8.19□□□□□ -1.1
RTA1P53047 URA8YJR103W 1737 nt8.19□□□□□ -1.1
RTA1P53047 YGR210CYGR210C 1236 nt8.17□□□□□ -1.1
RTA1P53047 NDE2YDL085W 1638 nt8.16□□□□□ -1.1
RTA1P53047 COX16YJL003W 357 nt8.15□□□□□ -1.1
RTA1P53047 YMR166CYMR166C 1107 nt8.15□□□□□ -1.1
RTA1P53047 ABP1YCR088W 1779 nt8.15□□□□□ -1.11
RTA1P53047 OCH1YGL038C 1443 nt8.14□□□□□ -1.11
RTA1P53047 TGA1tA(UGC)A 73 nt8.14□□□□□ -1.11
RTA1P53047 tA(UGC)EtA(UGC)E 73 nt8.14□□□□□ -1.11
RTA1P53047 tA(UGC)GtA(UGC)G 73 nt8.14□□□□□ -1.11
RTA1P53047 tA(UGC)LtA(UGC)L 73 nt8.14□□□□□ -1.11
RTA1P53047 tA(UGC)OtA(UGC)O 73 nt8.14□□□□□ -1.11
RTA1P53047 PAM17YKR065C 594 nt8.14□□□□□ -1.11
RTA1P53047 RNA170RNA170 169 nt8.14□□□□□ -1.11
RTA1P53047 DUR3YHL016C 2208 nt8.14□□□□□ -1.11
RTA1P53047 INO1YJL153C 1602 nt8.14□□□□□ -1.11
RTA1P53047 snR4snR4 186 nt8.13□□□□□ -1.11
RTA1P53047 PDC6YGR087C 1692 nt8.13□□□□□ -1.11
RTA1P53047 BUD31YCR063W 474 nt8.12□□□□□ -1.11
RTA1P53047 CAK1YFL029C 1107 nt8.12□□□□□ -1.11
RTA1P53047 YNL140CYNL140C 570 nt8.11□□□□□ -1.11
RTA1P53047 PUP1YOR157C 786 nt8.11□□□□□ -1.11
RTA1P53047 LSP1YPL004C 1026 nt8.11□□□□□ -1.11
RTA1P53047 YPL108WYPL108W 507 nt8.11□□□□□ -1.11
RTA1P53047 FCY1YPR062W 477 nt8.11□□□□□ -1.11
RTA1P53047 FRA1YLL029W 2250 nt8.11□□□□□ -1.11
RTA1P53047 EHT1YBR177C 1356 nt8.1□□□□□ -1.11
RTA1P53047 TIF3YPR163C 1311 nt8.1□□□□□ -1.11
RTA1P53047 RHO1YPR165W 630 nt8.1□□□□□ -1.11
RTA1P53047 SNU71YGR013W 1863 nt8.09□□□□□ -1.11
RTA1P53047 RRT14YIL127C 621 nt8.09□□□□□ -1.11
RTA1P53047 TDA4YJR116W 840 nt8.09□□□□□ -1.11
RTA1P53047 RCF1YML030W 480 nt8.09□□□□□ -1.11
RTA1P53047 TOK1YJL093C 2076 nt8.09□□□□□ -1.11
RTA1P53047 EHD3YDR036C 1503 nt8.08□□□□□ -1.12
RTA1P53047 LRO1YNR008W 1986 nt8.08□□□□□ -1.12
RTA1P53047 SAM50YNL026W 1455 nt8.08□□□□□ -1.12
RTA1P53047 TGL5YOR081C 2250 nt8.08□□□□□ -1.12
RTA1P53047 YCP4YCR004C 744 nt8.08□□□□□ -1.12
RTA1P53047 YGR137WYGR137W 375 nt8.08□□□□□ -1.12
RTA1P53047 INM1YHR046C 888 nt8.08□□□□□ -1.12
RTA1P53047 NPL6YMR091C 1308 nt8.07□□□□□ -1.12
RTA1P53047 THI73YLR004C 1572 nt8.07□□□□□ -1.12
RTA1P53047 GLY1YEL046C 1164 nt8.07□□□□□ -1.12
RTA1P53047 YPT31YER031C 672 nt8.07□□□□□ -1.12
RTA1P53047 SLG1YOR008C 1137 nt8.07□□□□□ -1.12
RTA1P53047 DIA4YHR011W 1341 nt8.06□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms