Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 YDR467CYDR467C 327 nt7.69□□□□□ -1.18
CDC9P04819 OPI3YJR073C 621 nt7.69□□□□□ -1.18
CDC9P04819 MFG1YDL233W 1377 nt7.69□□□□□ -1.18
CDC9P04819 KEL3YPL263C 1956 nt7.68□□□□□ -1.18
CDC9P04819 RPN14YGL004C 1254 nt7.68□□□□□ -1.18
CDC9P04819 YHR145CYHR145C 357 nt7.68□□□□□ -1.18
CDC9P04819 SPE2YOL052C 1191 nt7.68□□□□□ -1.18
CDC9P04819 SFL1YOR140W 2301 nt7.68□□□□□ -1.18
CDC9P04819 YJL045WYJL045W 1905 nt7.67□□□□□ -1.18
CDC9P04819 GRH1YDR517W 1119 nt7.66□□□□□ -1.18
CDC9P04819 CRC1YOR100C 984 nt7.66□□□□□ -1.18
CDC9P04819 YPL071CYPL071C 471 nt7.66□□□□□ -1.18
CDC9P04819 tD(GUC)BtD(GUC)B 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)DtD(GUC)D 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)G1tD(GUC)G1 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)G2tD(GUC)G2 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)I1tD(GUC)I1 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)I2tD(GUC)I2 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)J1tD(GUC)J1 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)J2tD(GUC)J2 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)J3tD(GUC)J3 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)J4tD(GUC)J4 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)KtD(GUC)K 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)L1tD(GUC)L1 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)L2tD(GUC)L2 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)MtD(GUC)M 72 nt7.65□□□□□ -1.18
CDC9P04819 tD(GUC)OtD(GUC)O 72 nt7.65□□□□□ -1.18
CDC9P04819 YEL023CYEL023C 2049 nt7.65□□□□□ -1.18
CDC9P04819 HOS2YGL194C 1359 nt7.65□□□□□ -1.18
CDC9P04819 MOB1YIL106W 945 nt7.65□□□□□ -1.18
CDC9P04819 AST1YBL069W 1290 nt7.65□□□□□ -1.18
CDC9P04819 MEX67YPL169C 1800 nt7.64□□□□□ -1.19
CDC9P04819 RTG2YGL252C 1767 nt7.64□□□□□ -1.19
CDC9P04819 ORM1YGR038W 669 nt7.64□□□□□ -1.19
CDC9P04819 YOR300WYOR300W 309 nt7.64□□□□□ -1.19
CDC9P04819 EDC2YER035W 438 nt7.63□□□□□ -1.19
CDC9P04819 SRP102YKL154W 735 nt7.63□□□□□ -1.19
CDC9P04819 CIT3YPR001W 1461 nt7.62□□□□□ -1.19
CDC9P04819 SWT21YNL187W 1074 nt7.62□□□□□ -1.19
CDC9P04819 MIM1YOL026C 342 nt7.62□□□□□ -1.19
CDC9P04819 SCO2YBR024W 906 nt7.62□□□□□ -1.19
CDC9P04819 MET1YKR069W 1782 nt7.61□□□□□ -1.19
CDC9P04819 TOM71YHR117W 1920 nt7.6□□□□□ -1.19
CDC9P04819 TOS1YBR162C 1368 nt7.6□□□□□ -1.19
CDC9P04819 GPM1YKL152C 744 nt7.6□□□□□ -1.19
CDC9P04819 INP54YOL065C 1155 nt7.6□□□□□ -1.19
CDC9P04819 snR31snR31 225 nt7.6□□□□□ -1.19
CDC9P04819 TRP2YER090W 1524 nt7.6□□□□□ -1.19
CDC9P04819 MTO1YGL236C 2010 nt7.6□□□□□ -1.19
CDC9P04819 DUR3YHL016C 2208 nt7.6□□□□□ -1.19
CDC9P04819 THI6YPL214C 1623 nt7.6□□□□□ -1.19
CDC9P04819 GCD11YER025W 1584 nt7.59□□□□□ -1.19
CDC9P04819 HBS1YKR084C 1836 nt7.59□□□□□ -1.19
CDC9P04819 HXT11YOL156W 1704 nt7.58□□□□□ -1.2
CDC9P04819 BUD31YCR063W 474 nt7.58□□□□□ -1.2
CDC9P04819 YGR210CYGR210C 1236 nt7.58□□□□□ -1.2
CDC9P04819 YMR147WYMR147W 672 nt7.58□□□□□ -1.2
CDC9P04819 YBL095WYBL095W 813 nt7.58□□□□□ -1.2
CDC9P04819 MAM3YOL060C 2121 nt7.58□□□□□ -1.2
CDC9P04819 KGD2YDR148C 1392 nt7.58□□□□□ -1.2
CDC9P04819 MRP1YDR347W 966 nt7.57□□□□□ -1.2
CDC9P04819 BUR6YER159C 429 nt7.57□□□□□ -1.2
CDC9P04819 AMF1YOR378W 1548 nt7.57□□□□□ -1.2
CDC9P04819 TGA1tA(UGC)A 73 nt7.56□□□□□ -1.2
CDC9P04819 tA(UGC)EtA(UGC)E 73 nt7.56□□□□□ -1.2
CDC9P04819 tA(UGC)GtA(UGC)G 73 nt7.56□□□□□ -1.2
CDC9P04819 tA(UGC)LtA(UGC)L 73 nt7.56□□□□□ -1.2
CDC9P04819 tA(UGC)OtA(UGC)O 73 nt7.56□□□□□ -1.2
CDC9P04819 THI3YDL080C 1830 nt7.56□□□□□ -1.2
CDC9P04819 ERO1YML130C 1692 nt7.56□□□□□ -1.2
CDC9P04819 CDC16YKL022C 2523 nt7.55□□□□□ -1.2
CDC9P04819 ENO2YHR174W 1314 nt7.55□□□□□ -1.2
CDC9P04819 HOG1YLR113W 1308 nt7.55□□□□□ -1.2
CDC9P04819 APM1YPL259C 1428 nt7.55□□□□□ -1.2
CDC9P04819 SIR2YDL042C 1689 nt7.55□□□□□ -1.2
CDC9P04819 TPC1YGR096W 945 nt7.55□□□□□ -1.2
CDC9P04819 SLD7YOR060C 774 nt7.55□□□□□ -1.2
CDC9P04819 OST3YOR085W 1053 nt7.55□□□□□ -1.2
CDC9P04819 AAT1YKL106W 1356 nt7.55□□□□□ -1.2
CDC9P04819 SDS24YBR214W 1584 nt7.54□□□□□ -1.2
CDC9P04819 YKL053WYKL053W 375 nt7.54□□□□□ -1.2
CDC9P04819 YKR012CYKR012C 378 nt7.54□□□□□ -1.2
CDC9P04819 SRN2YLR119W 642 nt7.54□□□□□ -1.2
CDC9P04819 YMR206WYMR206W 942 nt7.54□□□□□ -1.2
CDC9P04819 LEU2YCL018W 1095 nt7.54□□□□□ -1.2
CDC9P04819 MDL2YPL270W 2322 nt7.53□□□□□ -1.2
CDC9P04819 EMC3YKL207W 762 nt7.53□□□□□ -1.2
CDC9P04819 YPL108WYPL108W 507 nt7.53□□□□□ -1.2
CDC9P04819 ENO1YGR254W 1314 nt7.52□□□□□ -1.2
CDC9P04819 SRM1YGL097W 1449 nt7.52□□□□□ -1.2
CDC9P04819 YJL160CYJL160C 864 nt7.52□□□□□ -1.21
CDC9P04819 FCY1YPR062W 477 nt7.52□□□□□ -1.21
CDC9P04819 GGA2YHR108W 1758 nt7.51□□□□□ -1.21
CDC9P04819 ELP3YPL086C 1674 nt7.51□□□□□ -1.21
CDC9P04819 YHC3YJL059W 1227 nt7.51□□□□□ -1.21
CDC9P04819 YLR280CYLR280C 351 nt7.51□□□□□ -1.21
CDC9P04819 YMR316C-BYMR316C-B 309 nt7.51□□□□□ -1.21
CDC9P04819 YMC2YBR104W 990 nt7.51□□□□□ -1.21
CDC9P04819 YLR072WYLR072W 2082 nt7.5□□□□□ -1.21
CDC9P04819 ATG23YLR431C 1362 nt7.5□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms