Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Slc6a20bO88575 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Slc6a20bO88575 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Slc6a20bO88575 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Slc6a20bO88575 Mir3960-201ENSMUST00000198213 73 ntBASIC26.48■■□□□ 1.83
Slc6a20bO88575 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Slc6a20bO88575 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Slc6a20bO88575 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.47■■□□□ 1.83
Slc6a20bO88575 Gm15039-201ENSMUST00000118914 875 ntBASIC26.46■■□□□ 1.83
Slc6a20bO88575 Gm45364-201ENSMUST00000210883 159 ntBASIC26.46■■□□□ 1.83
Slc6a20bO88575 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.46■■□□□ 1.83
Slc6a20bO88575 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Slc6a20bO88575 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Slc6a20bO88575 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Slc6a20bO88575 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Slc6a20bO88575 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Slc6a20bO88575 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Slc6a20bO88575 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Slc6a20bO88575 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Slc6a20bO88575 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.41■■□□□ 1.82
Slc6a20bO88575 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Slc6a20bO88575 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Slc6a20bO88575 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Slc6a20bO88575 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Slc6a20bO88575 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Slc6a20bO88575 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.38■■□□□ 1.81
Slc6a20bO88575 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Slc6a20bO88575 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Slc6a20bO88575 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Slc6a20bO88575 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Slc6a20bO88575 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Slc6a20bO88575 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Slc6a20bO88575 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Slc6a20bO88575 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Slc6a20bO88575 Gm14523-201ENSMUST00000117260 558 ntBASIC26.32■■□□□ 1.8
Slc6a20bO88575 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.32■■□□□ 1.8
Slc6a20bO88575 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Slc6a20bO88575 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Slc6a20bO88575 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Slc6a20bO88575 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Slc6a20bO88575 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Slc6a20bO88575 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.29■■□□□ 1.8
Slc6a20bO88575 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Slc6a20bO88575 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc6a20bO88575 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc6a20bO88575 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc6a20bO88575 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Slc6a20bO88575 Gm22567-201ENSMUST00000175542 342 ntBASIC26.26■■□□□ 1.79
Slc6a20bO88575 Gm37136-201ENSMUST00000194368 194 ntBASIC26.26■■□□□ 1.79
Slc6a20bO88575 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Slc6a20bO88575 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Slc6a20bO88575 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Slc6a20bO88575 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.24■■□□□ 1.79
Slc6a20bO88575 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.23■■□□□ 1.79
Slc6a20bO88575 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.23■■□□□ 1.79
Slc6a20bO88575 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Slc6a20bO88575 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Slc6a20bO88575 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.22■■□□□ 1.79
Slc6a20bO88575 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Slc6a20bO88575 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.22■■□□□ 1.79
Slc6a20bO88575 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Slc6a20bO88575 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Slc6a20bO88575 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Slc6a20bO88575 Gm5812-201ENSMUST00000061073 957 ntBASIC26.21■■□□□ 1.79
Slc6a20bO88575 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Slc6a20bO88575 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Slc6a20bO88575 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.2■■□□□ 1.78
Slc6a20bO88575 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Slc6a20bO88575 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.2■■□□□ 1.78
Slc6a20bO88575 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.19■■□□□ 1.78
Slc6a20bO88575 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Slc6a20bO88575 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.19■■□□□ 1.78
Slc6a20bO88575 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc6a20bO88575 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc6a20bO88575 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc6a20bO88575 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc6a20bO88575 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Slc6a20bO88575 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Slc6a20bO88575 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Slc6a20bO88575 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Slc6a20bO88575 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Slc6a20bO88575 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Slc6a20bO88575 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Slc6a20bO88575 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Slc6a20bO88575 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Slc6a20bO88575 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.13■■□□□ 1.77
Slc6a20bO88575 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.13■■□□□ 1.77
Slc6a20bO88575 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Slc6a20bO88575 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Slc6a20bO88575 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.12■■□□□ 1.77
Slc6a20bO88575 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Slc6a20bO88575 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.12■■□□□ 1.77
Slc6a20bO88575 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms