Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FO393422.1-201ENST00000603908 708 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 SUMO2P15-201ENST00000604285 278 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 TUSC7.1-201ENST00000610969 165 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 CCT8P1-201ENST00000413611 1657 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RNU6-543P-201ENST00000362576 108 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RNU6-1214P-201ENST00000363650 109 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MIR137-201ENST00000385223 102 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MIR320B1-201ENST00000390209 79 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RNU2-22P-201ENST00000411266 212 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SKP279-201ENST00000411383 298 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 METTL15P3-201ENST00000415522 1221 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 TXNL1P1-201ENST00000429528 554 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC126120.1-201ENST00000431082 470 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC073909.1-201ENST00000447112 999 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC004129.2-201ENST00000457229 287 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC107015.1-201ENST00000466902 747 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 NDUFA5P9-201ENST00000472609 340 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC104687.1-201ENST00000485829 412 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SL57P-201ENST00000493687 290 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC105384.2-201ENST00000508433 640 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC109481.1-201ENST00000509173 282 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 RNA5SP34-201ENST00000516887 130 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MIR4505-201ENST00000582238 73 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MIR548Y-201ENST00000582739 110 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC069304.3-201ENST00000603938 1084 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC079395.2-201ENST00000610982 737 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC100847.1-201ENST00000611316 481 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MIR6730-201ENST00000622213 67 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AL691477.1-201ENST00000624398 162 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 OR11H2-202ENST00000641517 1085 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 NSRP1P1-201ENST00000444067 1693 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB1Q9Y5F3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SKP162-201ENST00000363605 345 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 SNORA74A-201ENST00000364089 198 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 HMGB1P20-201ENST00000402555 677 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms