Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 USP9YP9-201ENST00000429406 715 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC105031.1-201ENST00000518550 476 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC087283.1-201ENST00000604029 1074 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 MIR6748-201ENST00000610433 71 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC087821.1-201ENST00000623639 567 ntBASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.82□□□□□ -1.48
CLIP2Q9UDT6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 FABP7P2-201ENST00000429946 379 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC233702.9-201ENST00000581528 203 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 MIR4737-201ENST00000583979 81 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC020910.3-201ENST00000603701 874 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC015871.5-202ENST00000623252 701 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC097461.1-201ENST00000568928 2821 ntBASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP2Q9UDT6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ECM1P2-201ENST00000503354 1577 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 LRRC37BP1-201ENST00000398851 714 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 MIR1271-201ENST00000408537 86 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 GTF2IP5-201ENST00000414608 731 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC093414.1-201ENST00000434712 514 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 MRPL35P2-201ENST00000448009 511 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RPL23AP56-201ENST00000460778 453 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC007686.1-201ENST00000488511 463 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RNA5SP392-201ENST00000516905 112 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AL512310.9-201ENST00000553311 948 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC084759.1-201ENST00000561168 290 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 TVP23CP2-201ENST00000571473 623 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC011453.2-201ENST00000603737 729 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AC018695.5-201ENST00000605872 315 ntBASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLIP2Q9UDT6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP2Q9UDT6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms