Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RPS4XP20-201ENST00000505751 772 ntBASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 ATP5LP3-201ENST00000514223 304 ntBASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AP000864.1-201ENST00000609424 650 ntBASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AL592494.3-201ENST00000609485 464 ntBASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 AC015922.4-201ENST00000612568 690 ntBASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCNB1IP1Q9NPC3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCNB1IP1Q9NPC3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CCNB1IP1Q9NPC3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCNB1IP1Q9NPC3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CCNB1IP1Q9NPC3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.59□□□□□ -1.68
CCNB1IP1Q9NPC3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 SMG1P6-201ENST00000532337 2930 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC008549.2-201ENST00000333482 706 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SKP162-201ENST00000363605 345 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORA2.3-201ENST00000383920 135 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 MIR600-201ENST00000385007 98 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL35AP24-201ENST00000413846 330 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC009302.1-201ENST00000417147 390 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AL590609.2-201ENST00000421430 368 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC108075.1-201ENST00000424692 529 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RPS26P41-201ENST00000450370 284 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL10P17-201ENST00000453852 316 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL21P6-201ENST00000479171 504 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC015864.1-201ENST00000496512 544 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 STMN1P2-201ENST00000508435 439 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC022616.2-201ENST00000523185 300 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC021106.3-201ENST00000623925 531 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 AC093535.2-201ENST00000624769 2326 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 MAPK10-349ENST00000641767 3661 ntBASIC4.58□□□□□ -1.68
CCNB1IP1Q9NPC3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AC108751.5-201ENST00000492880 1336 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SKP104-201ENST00000362605 328 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORA73.1-201ENST00000363107 205 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RNA5SP372-201ENST00000390836 115 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 VDAC1P9-201ENST00000412766 841 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AC092162.1-201ENST00000432828 434 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 TXNP5-201ENST00000441043 315 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL517P-201ENST00000462240 305 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RPS4XP1-201ENST00000482189 787 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 NIP7P2-201ENST00000485801 544 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL558P-201ENST00000497468 299 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORD116-30-201ENST00000516468 85 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 snoU109.6-201ENST00000516831 118 ntBASIC4.57□□□□□ -1.68
CCNB1IP1Q9NPC3 RNA5SP373-201ENST00000517271 95 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms