Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 E2F6P2-201ENST00000420708 748 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 RPL23AP56-201ENST00000460778 453 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 RN7SL319P-201ENST00000480656 221 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC116562.1-201ENST00000485355 781 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 GOLGA5P1-201ENST00000507317 980 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC005000.1-201ENST00000536192 288 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 TVP23CP2-201ENST00000571473 623 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AC087783.2-201ENST00000605070 562 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 EIF3FP1-201ENST00000613970 806 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 CASC19-206ENST00000641028 1430 ntBASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.78□□□□□ -1.48
UPF3BQ9BZI7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
UPF3BQ9BZI7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC126323.6-202ENST00000568092 3511 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 UBBP2-201ENST00000376781 231 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 SNORA51.8-201ENST00000384234 132 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AL592291.1-201ENST00000403830 352 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 RNA5SP345-201ENST00000410646 108 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AL590139.1-201ENST00000416267 400 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC093414.1-201ENST00000434712 514 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 PRPF38AP2-201ENST00000438179 851 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 TPT1P1-201ENST00000458495 518 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 RPL37AP8-201ENST00000494116 276 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC110775.1-201ENST00000513721 462 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 RNU6-513P-201ENST00000516104 104 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC093249.4-201ENST00000564755 259 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC011453.2-201ENST00000603737 729 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC245389.2-201ENST00000616023 576 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC242843.1-201ENST00000618702 573 ntBASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF3BQ9BZI7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 U3.35-201ENST00000408405 208 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 RPL7P11-201ENST00000437586 658 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 RN7SL817P-201ENST00000480777 288 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AC020890.1-201ENST00000491837 504 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 RN7SL558P-201ENST00000497468 299 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 RNU6-709P-201ENST00000517257 104 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 OR5AZ1P-201ENST00000527448 943 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 MIR8069-1-201ENST00000616627 86 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 MIR8069-2-201ENST00000621412 86 ntBASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF3BQ9BZI7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms