Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 IGKV2-18-201ENST00000522607 343 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 OR11J2P-201ENST00000555298 907 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC011270.1-201ENST00000558606 583 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC022726.1-201ENST00000587475 207 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 MIR7154-201ENST00000620673 73 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 AC099654.2-201ENST00000433031 1980 ntBASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BPIFA3Q9BQP9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 RNU1-108P-201ENST00000362556 161 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 SNORA74A-201ENST00000364089 198 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 RNU6-729P-201ENST00000384399 107 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 U3.30-201ENST00000391308 210 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AP002530.1-201ENST00000405705 684 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 EIF4EP1-201ENST00000422311 642 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 TRBV8-1-201ENST00000481590 279 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 UBA52P7-201ENST00000486088 380 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 RNU1-6P-201ENST00000516290 144 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AC100770.1-201ENST00000532310 322 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 MTND2P17-201ENST00000550281 688 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AC008759.1-201ENST00000589783 983 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 AC007382.1-201ENST00000624376 2618 ntBASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BPIFA3Q9BQP9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 AC139713.2-215ENST00000641428 5037 ntBASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 HCFC2P1-201ENST00000392864 1592 ntBASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 AC104118.1-201ENST00000607625 1589 ntBASIC5.21□□□□□ -1.57
BPIFA3Q9BQP9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 RNU1-94P-201ENST00000362627 173 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 HMGB3P7-201ENST00000400214 611 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AP002371.1-201ENST00000463604 433 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 COPS8P2-201ENST00000473228 627 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC016687.1-201ENST00000482574 353 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC008897.1-201ENST00000494006 347 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC092490.3-201ENST00000545370 572 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 GLRXP2-201ENST00000555594 321 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC020910.3-201ENST00000603701 874 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC087283.1-201ENST00000604029 1074 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC093799.2-201ENST00000610062 578 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC008115.4-201ENST00000619780 775 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 AC055839.1-201ENST00000634467 498 ntBASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
BPIFA3Q9BQP9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms