Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 ZNF833P-201ENST00000424938 1494 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC092451.3-201ENST00000625067 1343 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AL590704.1-201ENST00000402856 794 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 MTND4LP17-201ENST00000414607 293 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 ARAFP2-201ENST00000440565 559 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AP000827.1-201ENST00000527814 258 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC096553.1-201ENST00000605169 829 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC093388.1-201ENST00000609166 430 ntBASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CSMD1Q96PZ7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 RN7SKP284-201ENST00000411002 343 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AP003730.1-201ENST00000524605 285 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC007786.3-201ENST00000615154 596 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC012314.7-201ENST00000619693 93 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC021146.4-201ENST00000309229 279 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 NDUFA5P1-201ENST00000433858 341 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC021193.1-201ENST00000511607 420 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC006116.5-201ENST00000591936 559 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC025857.2-201ENST00000602711 238 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 CR392039.5-201ENST00000623201 510 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ICE2P1-201ENST00000512800 1849 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ENPP7P11-201ENST00000505915 627 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC040958.1-201ENST00000561102 201 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 AC087499.8-201ENST00000578406 226 ntBASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CSMD1Q96PZ7 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC092376.2-201ENST00000622621 4116 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 RPL7AP49-201ENST00000429522 581 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AL591438.1-201ENST00000433508 581 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 SCAND3P1-201ENST00000439854 1060 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 RPL21P89-201ENST00000444021 467 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC116562.1-201ENST00000485355 781 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 HSPE1P5-201ENST00000561489 272 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC009643.2-201ENST00000603543 1448 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms