Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC109481.1-201ENST00000509173 282 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 RN7SKP99-201ENST00000517028 307 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 IGLVIV-64-201ENST00000518581 301 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC107918.3-201ENST00000533272 382 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC027243.2-201ENST00000602530 724 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL162431.4-201ENST00000604674 411 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC079610.2-201ENST00000604818 690 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC055764.2-201ENST00000610089 670 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 MIR7109-201ENST00000613748 65 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC245389.2-201ENST00000616023 576 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC242843.1-201ENST00000618702 573 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC132068.1-201ENST00000623805 459 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 GTF2H2B-203ENST00000508065 1432 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 MIR92A2-201ENST00000385299 75 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AL133388.1-201ENST00000404509 287 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 HMGB1P13-201ENST00000406019 642 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 RN7SKP240-201ENST00000410583 375 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AL596448.1-201ENST00000415024 392 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 LINC01347-201ENST00000417964 355 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC115283.1-201ENST00000427353 400 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 ELOCP3-201ENST00000439303 348 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 RN7SL423P-201ENST00000486202 304 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AP006245.2-201ENST00000522004 300 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 IGKV2-4-201ENST00000523070 340 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC079600.1-201ENST00000550326 297 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC018552.3-201ENST00000567416 561 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC005341.1-201ENST00000571086 708 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC134669.1-201ENST00000581275 672 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 ZNF92P2-201ENST00000600543 1059 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC011374.2-201ENST00000607135 526 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 MIR6071-201ENST00000616741 78 ntBASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS33AQ96AX1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC093535.2-201ENST00000624769 2326 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 METTL21EP-201ENST00000298105 713 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC005294.1-201ENST00000355509 281 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 RNA5SP223-201ENST00000365174 120 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 RN7SKP187-201ENST00000365536 330 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 HSPA8P15-201ENST00000401676 786 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms