Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 NF1P8-201ENST00000415351 1461 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 TRIM60P19-201ENST00000452879 1462 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.56□□□□□ -1.2
HLA-CQ95604 MAPK10-371ENST00000641952 5209 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 ABCF2P1-201ENST00000465687 1867 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 Y_RNA.46-201ENST00000362695 102 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RN7SKP44-201ENST00000363602 316 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RN7SKP237-201ENST00000364663 301 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RN7SKP130-201ENST00000364924 301 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 SNORA22B-201ENST00000383876 138 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AL034374.1-201ENST00000406329 351 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC115283.1-201ENST00000427353 400 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 MTCYBP9-201ENST00000431021 303 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 NPM1P18-201ENST00000434232 732 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 PMS2P9-201ENST00000441237 515 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC097359.1-201ENST00000447946 463 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 PPP1R2P5-201ENST00000457256 603 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RNU7-63P-201ENST00000459054 62 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RN7SL569P-201ENST00000494652 288 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AC108120.1-201ENST00000506543 991 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 RNU6-559P-201ENST00000516151 98 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 RN7SKP11-201ENST00000517018 287 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AP004609.2-201ENST00000532177 190 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 MIR3167-201ENST00000579623 85 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.56□□□□□ -1.2
HLA-CQ95604 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC019193.3-201ENST00000609144 554 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 MIR6127-201ENST00000614019 109 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 MIR7973-1-201ENST00000614683 76 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 AC089999.3-201ENST00000622440 577 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.56□□□□□ -1.2
HLA-CQ95604 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HLA-CQ95604 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 AL355488.2-201ENST00000609909 2850 ntBASIC7.56□□□□□ -1.2
HLA-CQ95604 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC7.56□□□□□ -1.2
HLA-CQ95604 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HLA-CQ95604 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.55□□□□□ -1.2
HLA-CQ95604 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 AC008937.3-201ENST00000606813 1700 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AF121897.1-201ENST00000411867 3980 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
HLA-CQ95604 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms