Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HMGB3P7-201ENST00000400214 611 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AL136116.2-201ENST00000404020 785 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AL035079.1-201ENST00000405210 287 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AL590139.1-201ENST00000416267 400 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AL807761.1-201ENST00000417622 171 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 COX6CP13-201ENST00000428703 226 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC093414.1-201ENST00000434712 514 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 RPS29P9-201ENST00000440360 171 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 RPS29P33-201ENST00000456717 146 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 RN7SL738P-201ENST00000470264 297 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC073073.1-201ENST00000493920 463 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC008897.1-201ENST00000494006 347 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 HMGB1P19-201ENST00000517578 577 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 AC091042.1-201ENST00000579213 173 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 uc_338.18-201ENST00000615451 175 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 ICE2P1-201ENST00000512800 1849 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 SALL4P2-201ENST00000423288 2910 ntBASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDND2Q8NHS1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 RNA5SP191-201ENST00000362585 102 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 ATP5HP3-201ENST00000396994 486 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 RNA5SP113-201ENST00000410486 84 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC019050.1-201ENST00000418508 492 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 NIPA2P1-201ENST00000426223 976 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC007559.1-201ENST00000428736 355 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL161722.1-201ENST00000446972 1032 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC004980.3-201ENST00000447046 365 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL356981.1-201ENST00000454879 684 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL356390.1-201ENST00000455684 397 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC022795.1-201ENST00000473808 480 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 GOLGA5P1-201ENST00000507317 980 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 RNA5SP249-201ENST00000516127 99 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC012339.2-201ENST00000523996 453 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AGGF1P9-201ENST00000561884 913 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 TVP23CP2-201ENST00000571473 623 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC020910.3-201ENST00000603701 874 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL353600.1-201ENST00000608148 251 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC097505.1-201ENST00000610199 565 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AC019206.1-201ENST00000621938 425 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL596275.2-204ENST00000641628 552 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL596275.2-206ENST00000641957 626 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 AL034370.1-201ENST00000397254 1590 ntBASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLDND2Q8NHS1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDND2Q8NHS1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDND2Q8NHS1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms