Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC010350.1-201ENST00000504908 231 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC090527.3-201ENST00000619041 548 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC015813.6-201ENST00000624409 5808 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 SNORA67-201ENST00000384423 137 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 RNU1-77P-201ENST00000390868 162 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 RPL23AP27-201ENST00000415161 451 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 CEACAMP7-201ENST00000444105 496 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 SBDSP1-204ENST00000453858 737 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC004815.1-201ENST00000484185 331 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 CYCSP28-201ENST00000534284 321 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC126177.5-201ENST00000549599 178 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 BNIP3P32-201ENST00000600015 554 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC136428.4-201ENST00000634254 1155 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AC138627.1-204ENST00000641894 765 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AL445487.1-201ENST00000415694 1580 ntBASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC112Q8NEF3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AL136116.2-201ENST00000404020 785 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AL121834.1-202ENST00000404494 277 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 RPL35AP24-201ENST00000413846 330 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC005033.1-201ENST00000428904 813 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 FAR2P1-206ENST00000449736 709 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 RPL23AP65-201ENST00000475608 468 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 RN7SL727P-201ENST00000482164 296 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC002456.2-201ENST00000509356 380 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 RNU6-84P-201ENST00000607737 102 ntBASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC112Q8NEF3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 XKRY2-202ENST00000623874 1581 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 XKRY-202ENST00000624960 1581 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 AP001002.1-201ENST00000625148 1513 ntBASIC5.3□□□□□ -1.56
CCDC112Q8NEF3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms