Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 AC084783.1-201ENST00000565846 910 ntBASIC7.2□□□□□ -1.26
VPS8Q8N3P4 AL034374.2-201ENST00000605281 548 ntBASIC7.2□□□□□ -1.26
VPS8Q8N3P4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 STX3-208ENST00000641815 3236 ntBASIC7.2□□□□□ -1.26
VPS8Q8N3P4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS8Q8N3P4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 FAM3C2-201ENST00000312214 681 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RNA5SP151-201ENST00000365632 117 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 NPM1P37-201ENST00000403105 874 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RPL23AP93-201ENST00000440847 484 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RPL7AP10-201ENST00000481016 791 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RN7SKP92-201ENST00000517266 244 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RAB9BP1-201ENST00000519581 626 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 AC034205.1-201ENST00000520621 638 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 AC000374.1-201ENST00000434698 1745 ntBASIC7.19□□□□□ -1.26
VPS8Q8N3P4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.19□□□□□ -1.26
VPS8Q8N3P4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 Z98745.1-201ENST00000402553 494 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL080315.1-201ENST00000406055 466 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 EIF4A1P1-201ENST00000420241 934 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 RAD23BP1-201ENST00000421404 1227 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AP001324.1-201ENST00000428553 399 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC013356.1-201ENST00000489027 564 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AP001160.4-201ENST00000596971 382 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC016397.1-201ENST00000412463 242 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 RPL36AP10-201ENST00000421785 322 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 RPL12P34-201ENST00000424532 479 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC016712.1-201ENST00000431088 378 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 ELOCP3-201ENST00000439303 348 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 EIF2S2P2-201ENST00000447161 982 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL162591.2-201ENST00000449634 317 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC069061.3-201ENST00000582254 823 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL133243.1-201ENST00000614487 366 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AL121873.1-201ENST00000616013 524 ntBASIC7.18□□□□□ -1.26
VPS8Q8N3P4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
VPS8Q8N3P4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 RNU1-130P-201ENST00000363930 160 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 CENPIP1-201ENST00000425713 902 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 TPT1P13-201ENST00000449760 499 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AC020634.1-201ENST00000608701 549 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 MIR8069-1-201ENST00000616627 86 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 MIR8069-2-201ENST00000621412 86 ntBASIC7.17□□□□□ -1.26
VPS8Q8N3P4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS8Q8N3P4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS8Q8N3P4 AC003985.2-201ENST00000562268 1669 ntBASIC7.16□□□□□ -1.26
VPS8Q8N3P4 MTHFD2P5-201ENST00000320415 844 ntBASIC7.16□□□□□ -1.26
VPS8Q8N3P4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms