Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 DNM1P47-203ENST00000571780 12667 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 AC092104.1-201ENST00000497346 1441 ntBASIC5.56□□□□□ -1.52
VRK3Q8IV63 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VRK3Q8IV63 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK3Q8IV63 CASC19-248ENST00000641674 1356 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 MTND5P11-201ENST00000511037 1812 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC123769.1-201ENST00000530992 3192 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AP002512.4-202ENST00000641599 4530 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 RNU4-51P-201ENST00000364206 140 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 RNA5SP284-201ENST00000384547 118 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 RNU6-83P-201ENST00000384568 112 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 RPL11P3-201ENST00000395256 523 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL021407.1-201ENST00000404531 386 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 RPL30P16-201ENST00000419341 429 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC019178.2-201ENST00000423595 505 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 BX119321.1-201ENST00000428912 797 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC079807.1-201ENST00000429993 481 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC013410.1-201ENST00000436223 1232 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 RPL23AP19-201ENST00000436229 369 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC097262.1-201ENST00000452559 548 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 NDUFA12P1-201ENST00000455914 406 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC090114.3-201ENST00000479267 829 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 OR7E157P-201ENST00000494376 911 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 DUTP7-201ENST00000507982 486 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL031985.2-201ENST00000600955 480 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC078795.2-201ENST00000602835 1252 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 MTND3P19-201ENST00000603825 345 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC092794.1-201ENST00000612734 582 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC090607.5-201ENST00000615692 224 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 AC079248.2-201ENST00000623779 326 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AP003400.5-201ENST00000624827 617 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 AL591135.1-201ENST00000401578 5914 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 OR13C1P-202ENST00000641378 2919 ntBASIC5.55□□□□□ -1.52
VRK3Q8IV63 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.55□□□□□ -1.52
VRK3Q8IV63 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VRK3Q8IV63 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 GAPDHP24-201ENST00000328713 983 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VRK3Q8IV63 AC005042.1-201ENST00000393397 800 ntBASIC5.54□□□□□ -1.52
VRK3Q8IV63 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.54□□□□□ -1.52
VRK3Q8IV63 NANOGP2-201ENST00000435391 727 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms