Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.52□□□□□ -1.69
RFX4Q33E94 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
RFX4Q33E94 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.52□□□□□ -1.69
RFX4Q33E94 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AL021331.1-201ENST00000402817 582 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AL139039.2-201ENST00000407436 479 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 RN7SKP114-201ENST00000410327 279 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 RN7SKP59-201ENST00000410520 314 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC106901.1-201ENST00000425086 698 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.52□□□□□ -1.69
RFX4Q33E94 RPL12P11-201ENST00000439970 501 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 SPRYD7P1-201ENST00000443861 570 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 TDGF1P1-201ENST00000445734 527 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.52□□□□□ -1.69
RFX4Q33E94 SEPT14P1-201ENST00000458703 648 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC107015.1-201ENST00000466902 747 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.52□□□□□ -1.69
RFX4Q33E94 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 NIP7P2-201ENST00000485801 544 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC108693.1-201ENST00000496068 432 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AP001960.1-201ENST00000506494 658 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 PGAM1P13-201ENST00000507497 754 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC026688.1-201ENST00000520639 1168 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC018442.3-201ENST00000523025 183 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AL049779.2-201ENST00000553847 315 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.52□□□□□ -1.69
RFX4Q33E94 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC095055.1-201ENST00000603472 1113 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 AP005212.4-201ENST00000614206 710 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.52□□□□□ -1.69
RFX4Q33E94 AC055839.1-201ENST00000634467 498 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 AC011493.1-201ENST00000596753 1632 ntBASIC4.52□□□□□ -1.69
RFX4Q33E94 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.52□□□□□ -1.69
RFX4Q33E94 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
RFX4Q33E94 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
RFX4Q33E94 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RFX4Q33E94 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.51□□□□□ -1.69
RFX4Q33E94 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
RFX4Q33E94 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 AL589994.1-201ENST00000404962 340 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 OR3A2-201ENST00000408891 1076 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX4Q33E94 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 AL121776.1-201ENST00000429337 372 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.51□□□□□ -1.69
RFX4Q33E94 RPL7L1P1-201ENST00000448259 785 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 RPL7AP28-201ENST00000464513 571 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AC011411.1-201ENST00000509592 876 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AC026979.4-201ENST00000606555 645 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AL049767.1-202ENST00000637826 242 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX4Q33E94 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 AL445487.1-201ENST00000415694 1580 ntBASIC4.51□□□□□ -1.69
RFX4Q33E94 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.51□□□□□ -1.69
RFX4Q33E94 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.51□□□□□ -1.69
RFX4Q33E94 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RFX4Q33E94 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms