Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC005033.1-201ENST00000428904 813 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 PUDPP2-201ENST00000431423 643 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 NPM1P39-201ENST00000449818 867 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 USP9YP12-201ENST00000450481 570 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 RPL7P48-201ENST00000461513 746 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 RPL23AP80-201ENST00000495605 424 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 HMGB1P28-201ENST00000507778 552 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AC009646.1-201ENST00000510455 318 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AF131216.2-201ENST00000512316 564 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 MTCO1P35-201ENST00000515270 228 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 RNU6-885P-201ENST00000516607 104 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 SNORA18.6-201ENST00000516792 115 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 HMGB1P23-201ENST00000518743 568 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AP001893.2-201ENST00000526949 202 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 SLC2A13P1-201ENST00000531560 322 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC008083.2-201ENST00000546707 476 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AL133457.1-201ENST00000564251 987 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AL359704.2-201ENST00000604335 521 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AL683813.2-201ENST00000605245 502 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AP004247.3-201ENST00000608682 624 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AL020991.1-201ENST00000612314 373 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC027506.1-201ENST00000621395 198 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 AP003122.6-201ENST00000623831 495 ntBASIC6.53□□□□□ -1.36
PCDH1Q08174 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDH1Q08174 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDH1Q08174 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDH1Q08174 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PCDH1Q08174 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDH1Q08174 AC127070.3-201ENST00000503695 3263 ntBASIC6.52□□□□□ -1.36
PCDH1Q08174 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AL033543.1-201ENST00000623440 13454 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 AL022578.1-201ENST00000439330 1433 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC006213.6-201ENST00000623722 4179 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 OR2M1P-201ENST00000318104 951 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PCDH1Q08174 Y_RNA.295-201ENST00000364918 102 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 Y_RNA.509-201ENST00000384506 99 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RNA5SP176-201ENST00000390956 110 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 OR7E101P-201ENST00000400428 513 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 RPS24P12-201ENST00000402084 394 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 GSTA9P-201ENST00000406231 611 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AL512422.1-201ENST00000407033 553 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 CYCSP17-201ENST00000407870 315 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RN7SKP91-201ENST00000410852 288 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 RPL21P111-201ENST00000418453 477 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 MTCYBP45-201ENST00000435243 565 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RPL23AP28-201ENST00000448062 470 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 SULT1D1P-201ENST00000458020 882 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RN7SL492P-201ENST00000460700 295 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RN7SL654P-201ENST00000479178 292 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms