Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RGS17P1-201ENST00000423358 553 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 AC110768.1-201ENST00000509222 400 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 FCF1-203ENST00000553615 954 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 U6.105-201ENST00000637379 88 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HSPG2P98160 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 SNORA71.2-201ENST00000364941 134 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 U3.28-201ENST00000391249 210 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 AC040958.1-201ENST00000561102 201 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 AP001002.1-201ENST00000625148 1513 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
HSPG2P98160 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 WAC-209ENST00000428935 1320 ntTSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 AL583835.1-201ENST00000399570 407 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 ANAPC1P1-201ENST00000426186 2145 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 AC069061.3-201ENST00000582254 823 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC2.81□□□□□ -1.96
HSPG2P98160 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.81□□□□□ -1.96
HSPG2P98160 AC084757.4-201ENST00000616350 526 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HSPG2P98160 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 AL137058.3-201ENST00000624531 3099 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HSPG2P98160 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 LCOR-201ENST00000286067 4542 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HSPG2P98160 SNRPFP1-201ENST00000414761 252 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.8□□□□□ -1.96
HSPG2P98160 AC011998.1-201ENST00000433403 117 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 RN7SL517P-201ENST00000462240 305 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 RPL7P49-201ENST00000471402 708 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 FKBP1BP1-201ENST00000553366 325 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 AP005205.1-201ENST00000563503 508 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 MAPK10-371ENST00000641952 5209 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 CPHL1P-201ENST00000461341 3407 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 U8.11-201ENST00000384699 133 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 U8.12-201ENST00000384701 133 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC2.8□□□□□ -1.96
HSPG2P98160 TMX2P1-201ENST00000436507 708 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 RPL23AP52-201ENST00000439311 478 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 RPS29P7-201ENST00000439662 171 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 U8.18-201ENST00000459285 133 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 AC022133.1-201ENST00000490961 571 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC2.8□□□□□ -1.96
HSPG2P98160 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HSPG2P98160 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms