Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RHBDL3P58872 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RHBDL3P58872 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RHBDL3P58872 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RHBDL3P58872 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RHBDL3P58872 MTND4P31-201ENST00000425607 1343 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC090017.1-201ENST00000548612 1779 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RHBDL3P58872 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RHBDL3P58872 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.29□□□□□ -1.4
RHBDL3P58872 MIR1182-201ENST00000408363 97 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 VTA1P1-201ENST00000414044 866 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 TCEA1P4-201ENST00000415066 844 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC008173.1-201ENST00000418901 264 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC099336.2-201ENST00000422457 254 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AL512637.2-201ENST00000431287 1256 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 MTCO1P43-201ENST00000431831 488 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AL031663.1-201ENST00000437445 219 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.29□□□□□ -1.4
RHBDL3P58872 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC092647.3-201ENST00000443044 633 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AL645937.3-201ENST00000453647 936 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 DNAJB5P1-201ENST00000454004 806 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 MTCO1P18-201ENST00000455518 1419 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC099560.2-201ENST00000457554 255 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC104629.1-201ENST00000494226 508 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 GTF2F2P1-201ENST00000511083 675 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC106734.1-201ENST00000568646 663 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC011840.5-201ENST00000582125 771 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 AC006272.2-201ENST00000594725 163 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 ZNF92P3-201ENST00000596594 954 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 PSMA6P4-201ENST00000603247 718 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC005014.3-201ENST00000605985 190 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC112503.2-201ENST00000609005 552 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AC055764.2-201ENST00000610089 670 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 AL049539.1-201ENST00000611964 459 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RHBDL3P58872 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 AP000473.2-201ENST00000602659 1537 ntBASIC6.29□□□□□ -1.4
RHBDL3P58872 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RHBDL3P58872 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.29□□□□□ -1.4
RHBDL3P58872 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.29□□□□□ -1.4
RHBDL3P58872 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 SNORA63.3-201ENST00000362682 132 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RHBDL3P58872 RNU6-796P-201ENST00000391086 107 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RHBDL3P58872 NPM1P18-201ENST00000434232 732 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 FTH1P16-201ENST00000435241 552 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.28□□□□□ -1.4
RHBDL3P58872 HIGD1AP8-201ENST00000453927 274 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC079168.1-201ENST00000458741 345 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 RPL32P14-201ENST00000463196 378 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC008379.1-201ENST00000463655 464 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC097484.1-201ENST00000471148 389 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 RPL21P47-201ENST00000483696 477 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC005912.1-201ENST00000495392 255 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.28□□□□□ -1.4
RHBDL3P58872 AC121161.1-201ENST00000510606 652 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.28□□□□□ -1.4
RHBDL3P58872 EIF3KP3-201ENST00000514461 639 ntBASIC6.28□□□□□ -1.4
RHBDL3P58872 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms