Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.35□□□□□ -1.07
NUBP1P53384 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC8.35□□□□□ -1.07
NUBP1P53384 AC026877.1-201ENST00000476047 1411 ntBASIC8.35□□□□□ -1.07
NUBP1P53384 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NUBP1P53384 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC8.35□□□□□ -1.07
NUBP1P53384 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NUBP1P53384 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
NUBP1P53384 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NUBP1P53384 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NUBP1P53384 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NUBP1P53384 RN7SKP184-201ENST00000362348 333 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NUBP1P53384 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 MIR628-201ENST00000385229 95 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
NUBP1P53384 RNU6-493P-201ENST00000391321 108 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AL161787.1-201ENST00000401543 174 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AC011753.4-201ENST00000417974 311 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 OR4C10P-201ENST00000434991 931 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 CEACAMP6-201ENST00000452007 574 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 TREML3P-201ENST00000457327 501 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AP000926.1-201ENST00000479573 241 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 RPS10P28-201ENST00000480396 498 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AC084017.1-201ENST00000483240 860 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 UBA52P7-201ENST00000486088 380 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AC011411.1-201ENST00000509592 876 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AC107393.1-201ENST00000512403 346 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 IGKV1D-32-201ENST00000517449 318 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AC034114.1-201ENST00000520293 285 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 AP006587.4-201ENST00000526053 529 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.34□□□□□ -1.07
NUBP1P53384 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.34□□□□□ -1.07
NUBP1P53384 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 OR1X1P-201ENST00000606159 931 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 AC007938.1-201ENST00000562524 2902 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 AC073539.1-201ENST00000599810 2094 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 PPP4R1L-202ENST00000334187 2746 ntBASIC8.34□□□□□ -1.07
NUBP1P53384 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8.34□□□□□ -1.07
NUBP1P53384 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.34□□□□□ -1.07
NUBP1P53384 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NUBP1P53384 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NUBP1P53384 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NUBP1P53384 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.34□□□□□ -1.08
NUBP1P53384 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
NUBP1P53384 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NUBP1P53384 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NUBP1P53384 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 OSBPL9P4-201ENST00000371707 1800 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 AC023824.7-201ENST00000623041 5731 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 EIF2AP4-201ENST00000424793 1781 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 AL445933.1-201ENST00000434240 2242 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 AC011453.1-201ENST00000597619 2239 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
NUBP1P53384 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.33□□□□□ -1.08
NUBP1P53384 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 Y_RNA.199-201ENST00000364014 102 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 RNU6-596P-201ENST00000365395 98 ntBASIC8.33□□□□□ -1.08
NUBP1P53384 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NUBP1P53384 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms