Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP98P52948 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 LINC00622-201ENST00000562811 1570 ntBASIC5.74□□□□□ -1.49
NUP98P52948 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NUP98P52948 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP98P52948 MAPK10-328ENST00000641553 4009 ntBASIC5.74□□□□□ -1.49
NUP98P52948 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP98P52948 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUP98P52948 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP98P52948 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NUP98P52948 AL356095.1-201ENST00000417217 199 ntBASIC5.74□□□□□ -1.49
NUP98P52948 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
NUP98P52948 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP98P52948 ISCUP1-201ENST00000454451 448 ntBASIC5.74□□□□□ -1.49
NUP98P52948 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP98P52948 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
NUP98P52948 AC127024.5-201ENST00000580085 462 ntBASIC5.74□□□□□ -1.49
NUP98P52948 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP98P52948 MIR492-201ENST00000638676 116 ntBASIC5.74□□□□□ -1.49
NUP98P52948 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NUP98P52948 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP98P52948 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NUP98P52948 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP98P52948 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 CPHL1P-201ENST00000461341 3407 ntBASIC5.73□□□□□ -1.49
NUP98P52948 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 AC108467.2-201ENST00000617640 1597 ntBASIC5.73□□□□□ -1.49
NUP98P52948 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP98P52948 RPL35AP21-201ENST00000437667 333 ntBASIC5.73□□□□□ -1.49
NUP98P52948 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP98P52948 AC053481.1-201ENST00000467217 306 ntBASIC5.73□□□□□ -1.49
NUP98P52948 AC073073.1-201ENST00000493920 463 ntBASIC5.73□□□□□ -1.49
NUP98P52948 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP98P52948 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.73□□□□□ -1.49
NUP98P52948 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.73□□□□□ -1.49
NUP98P52948 RN7SL176P-201ENST00000580352 264 ntBASIC5.73□□□□□ -1.49
NUP98P52948 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.73□□□□□ -1.49
NUP98P52948 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.73□□□□□ -1.49
NUP98P52948 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NUP98P52948 BCORP1-203ENST00000513194 5093 ntBASIC5.73□□□□□ -1.49
NUP98P52948 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.73□□□□□ -1.49
NUP98P52948 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUP98P52948 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP98P52948 NPM1P26-201ENST00000426339 738 ntBASIC5.72□□□□□ -1.49
NUP98P52948 BTF3P6-201ENST00000448054 499 ntBASIC5.72□□□□□ -1.49
NUP98P52948 DHFRP3-201ENST00000455595 559 ntBASIC5.72□□□□□ -1.49
NUP98P52948 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP98P52948 AP000619.2-201ENST00000546014 969 ntBASIC5.72□□□□□ -1.49
NUP98P52948 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 AL035461.2-201ENST00000619201 524 ntBASIC5.72□□□□□ -1.49
NUP98P52948 AC005261.4-201ENST00000600047 1385 ntBASIC5.72□□□□□ -1.49
NUP98P52948 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP98P52948 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP98P52948 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 AC107068.1-201ENST00000563286 4218 ntBASIC5.72□□□□□ -1.49
NUP98P52948 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NUP98P52948 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 AC073136.1-201ENST00000449426 2884 ntBASIC5.72□□□□□ -1.49
NUP98P52948 OR51H2P-202ENST00000641424 3046 ntBASIC5.72□□□□□ -1.49
NUP98P52948 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP98P52948 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
NUP98P52948 AC017079.1-201ENST00000333650 415 ntBASIC5.71□□□□□ -1.49
NUP98P52948 MIR134-201ENST00000385258 73 ntBASIC5.71□□□□□ -1.49
NUP98P52948 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP98P52948 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.71□□□□□ -1.49
NUP98P52948 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.71□□□□□ -1.49
NUP98P52948 MTCYBP21-201ENST00000443300 1113 ntBASIC5.71□□□□□ -1.49
NUP98P52948 RPL7P19-201ENST00000469948 618 ntBASIC5.71□□□□□ -1.49
NUP98P52948 AC041039.1-201ENST00000485656 536 ntBASIC5.71□□□□□ -1.49
NUP98P52948 AC020890.1-201ENST00000491837 504 ntBASIC5.71□□□□□ -1.49
NUP98P52948 RN7SL691P-201ENST00000494487 301 ntBASIC5.71□□□□□ -1.49
NUP98P52948 AK4P6-201ENST00000505168 528 ntBASIC5.71□□□□□ -1.49
NUP98P52948 AC090515.3-201ENST00000560431 315 ntBASIC5.71□□□□□ -1.49
NUP98P52948 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.71□□□□□ -1.49
NUP98P52948 MIR6891-201ENST00000618788 93 ntBASIC5.71□□□□□ -1.49
NUP98P52948 AC015804.1-201ENST00000622935 435 ntBASIC5.71□□□□□ -1.49
NUP98P52948 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP98P52948 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP98P52948 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
NUP98P52948 DDX18P5-201ENST00000534547 1306 ntBASIC5.71□□□□□ -1.49
NUP98P52948 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP98P52948 SCARNA15-201ENST00000607520 4325 ntBASIC5.71□□□□□ -1.5
NUP98P52948 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NUP98P52948 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP98P52948 SDHCP2-201ENST00000398565 501 ntBASIC5.71□□□□□ -1.5
NUP98P52948 AL022722.2-201ENST00000402519 180 ntBASIC5.71□□□□□ -1.5
NUP98P52948 TMBIM7P-201ENST00000418074 855 ntBASIC5.71□□□□□ -1.5
NUP98P52948 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms