Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC104966.1-201ENST00000467010 1464 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC025574.1-201ENST00000554784 1653 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 CASC19-248ENST00000641674 1356 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC100778.3-201ENST00000580060 1750 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC107027.3-201ENST00000565095 3473 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 OR9G4-201ENST00000302957 984 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NKX2-1P43699 RN7SKP171-201ENST00000364417 303 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 RNU6-304P-201ENST00000364855 107 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 RNU6-1005P-201ENST00000384519 107 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 RPL23AP59-201ENST00000399415 461 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 MIR1275-201ENST00000408770 80 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC104333.2-201ENST00000422630 192 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC092447.2-201ENST00000435487 669 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AL606517.1-201ENST00000446914 387 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AL354710.1-201ENST00000453641 246 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 PPIAP27-201ENST00000453800 265 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC068228.1-201ENST00000461723 211 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC023194.2-201ENST00000465398 406 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC005165.2-201ENST00000466070 380 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC104687.1-201ENST00000485829 412 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 RNU6-513P-201ENST00000516104 104 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 RN7SKP183-201ENST00000517169 324 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 FTH1P11-201ENST00000517577 551 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.41□□□□□ -1.7
NKX2-1P43699 OR8G3P-201ENST00000533406 921 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 POLR2KP1-201ENST00000553226 168 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC007956.1-201ENST00000555623 542 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC022884.2-201ENST00000578535 580 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC006116.5-201ENST00000591936 559 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 ZNF92P3-201ENST00000596594 954 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC063977.5-201ENST00000601044 974 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC090525.3-201ENST00000605601 189 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AP002802.2-201ENST00000605877 235 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 MIR6793-201ENST00000612376 63 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC109583.2-201ENST00000617367 129 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC078880.5-201ENST00000617845 421 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 FRG1HP-204ENST00000617940 757 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC139769.3-201ENST00000618383 175 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-1P43699 MIR6839-201ENST00000620425 113 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 AC135068.5-201ENST00000624197 983 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.41□□□□□ -1.7
NKX2-1P43699 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.41□□□□□ -1.7
NKX2-1P43699 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-1P43699 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 SSXP3-201ENST00000442971 1300 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-1P43699 AC000374.1-201ENST00000434698 1745 ntBASIC4.41□□□□□ -1.7
NKX2-1P43699 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-1P43699 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.7
NKX2-1P43699 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
NKX2-1P43699 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-1P43699 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
NKX2-1P43699 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.4□□□□□ -1.7
NKX2-1P43699 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms