Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR3158-1-201ENST00000583596 81 ntBASIC5.69□□□□□ -1.5
SCN4AP35499 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN4AP35499 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.69□□□□□ -1.5
SCN4AP35499 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN4AP35499 AL161912.2-201ENST00000565707 3007 ntBASIC5.69□□□□□ -1.5
SCN4AP35499 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN4AP35499 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN4AP35499 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN4AP35499 ZNF137P-201ENST00000456718 1920 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 AC005261.4-201ENST00000600047 1385 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN4AP35499 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN4AP35499 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 MAPK10-286ENST00000641208 8747 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 LINC00993-201ENST00000420453 540 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN4AP35499 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 AC105137.1-201ENST00000484355 562 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.68□□□□□ -1.5
SCN4AP35499 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN4AP35499 MIR4286-201ENST00000580651 93 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 AC010632.3-201ENST00000611377 369 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 AC067931.1-201ENST00000624190 671 ntBASIC5.68□□□□□ -1.5
SCN4AP35499 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SCN4AP35499 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN4AP35499 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN4AP35499 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN4AP35499 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SCN4AP35499 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN4AP35499 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SCN4AP35499 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 RNA5SP387-201ENST00000364226 106 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 RPL23AP59-201ENST00000399415 461 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 OR1F12-201ENST00000402365 945 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AC091868.1-201ENST00000508746 304 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN4AP35499 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 AC090286.3-201ENST00000573133 187 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN4AP35499 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SCN4AP35499 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN4AP35499 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 UGT2B26P-201ENST00000508672 1613 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN4AP35499 AC008758.3-201ENST00000507003 1829 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN4AP35499 MIR383-201ENST00000362257 73 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 RNU6-761P-201ENST00000384148 107 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 COX6CP13-201ENST00000428703 226 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN4AP35499 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN4AP35499 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN4AP35499 AC116553.2-201ENST00000564203 463 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AC084783.1-201ENST00000565846 910 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AL049794.2-201ENST00000616301 365 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 AC090017.1-201ENST00000548612 1779 ntBASIC5.67□□□□□ -1.5
SCN4AP35499 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN4AP35499 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN4AP35499 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN4AP35499 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN4AP35499 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.66□□□□□ -1.5
SCN4AP35499 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SCN4AP35499 RNA5SP366-201ENST00000365454 123 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 AC009237.10-201ENST00000414112 510 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 AC009237.5-201ENST00000414271 501 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 AL358232.1-201ENST00000448030 501 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 RPL36AP41-201ENST00000493820 306 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 MTND4LP2-201ENST00000502312 285 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN4AP35499 AC099676.1-201ENST00000608886 657 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 AL133243.1-201ENST00000614487 366 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.66□□□□□ -1.5
SCN4AP35499 AC133552.1-201ENST00000569988 4007 ntBASIC5.66□□□□□ -1.5
SCN4AP35499 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCN4AP35499 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SCN4AP35499 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN4AP35499 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN4AP35499 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN4AP35499 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN4AP35499 SSR1P1-201ENST00000407630 814 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms