Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 AL160175.1-201ENST00000428124 247 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 TCEA1P1-201ENST00000449716 880 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 AL691482.1-201ENST00000453255 87 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 SYT14P1-201ENST00000481459 721 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 AC006499.3-201ENST00000506077 748 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 RNA5SP43-201ENST00000516559 110 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC004923.2-201ENST00000529649 369 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXD13P35453 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXD13P35453 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 KATNBL1P5-201ENST00000605015 517 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC012557.1-201ENST00000607115 611 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC110792.4-201ENST00000609843 298 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AP000894.4-201ENST00000610185 483 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 Z95327.3-201ENST00000610385 572 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD13P35453 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD13P35453 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD13P35453 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 ZNF90P1-201ENST00000480493 1951 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
HOXD13P35453 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 RN7SKP113-201ENST00000363891 295 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 MIR320B1-201ENST00000390209 79 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXD13P35453 LRRC37BP1-201ENST00000398851 714 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 RN7SKP222-201ENST00000410651 315 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD13P35453 PTP4A1P3-201ENST00000433661 420 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD13P35453 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 AL163193.1-201ENST00000444895 788 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD13P35453 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD13P35453 AC025768.1-201ENST00000510057 267 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD13P35453 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 snoU109.6-201ENST00000516831 118 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 RNA5SP392-201ENST00000516905 112 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD13P35453 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 NDUFB4P11-201ENST00000560510 395 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD13P35453 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 CBX3P2-202ENST00000583365 535 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXD13P35453 AL450270.1-201ENST00000606160 391 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AC004775.1-201ENST00000607389 753 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 AC016769.4-201ENST00000616893 535 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 BX005214.3-202ENST00000619809 325 ntBASIC5.53□□□□□ -1.52
HOXD13P35453 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD13P35453 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD13P35453 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD13P35453 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXD13P35453 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD13P35453 AC007996.1-201ENST00000620414 2821 ntBASIC5.52□□□□□ -1.53
HOXD13P35453 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD13P35453 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXD13P35453 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXD13P35453 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD13P35453 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD13P35453 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXD13P35453 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms