Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.44□□□□□ -1.22
CLIP1P30622 UQCRBP1-201ENST00000421129 336 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 AL359219.2-201ENST00000555184 348 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CLIP1P30622 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 AC005191.1-201ENST00000603950 358 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC100847.1-201ENST00000611316 481 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AC015804.1-201ENST00000622935 435 ntBASIC7.44□□□□□ -1.22
CLIP1P30622 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.44□□□□□ -1.22
CLIP1P30622 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP1P30622 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
CLIP1P30622 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CLIP1P30622 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CLIP1P30622 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CLIP1P30622 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC7.43□□□□□ -1.22
CLIP1P30622 AL449283.1-201ENST00000602631 3403 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 AC093671.1-201ENST00000624981 2929 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP1P30622 AC006065.1-201ENST00000422539 802 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.43□□□□□ -1.22
CLIP1P30622 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.43□□□□□ -1.22
CLIP1P30622 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC7.43□□□□□ -1.22
CLIP1P30622 RN7SKP21-201ENST00000516503 220 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CLIP1P30622 OR52H1-202ENST00000641796 1061 ntBASIC7.43□□□□□ -1.22
CLIP1P30622 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.43□□□□□ -1.22
CLIP1P30622 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CLIP1P30622 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CLIP1P30622 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP1P30622 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP1P30622 RNA5SP447-201ENST00000363749 119 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 RPL12P28-201ENST00000430852 489 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP1P30622 MTND2P28-201ENST00000457540 1044 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 SCARNA10-201ENST00000459255 330 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 AC020898.1-201ENST00000474167 787 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP1P30622 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP1P30622 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CLIP1P30622 AC015912.2-201ENST00000571053 181 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 AC103792.1-201ENST00000603591 919 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 AC005962.2-201ENST00000611427 652 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 AC011944.2-201ENST00000624440 683 ntBASIC7.42□□□□□ -1.22
CLIP1P30622 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP1P30622 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP1P30622 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.41□□□□□ -1.22
CLIP1P30622 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.41□□□□□ -1.22
CLIP1P30622 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC7.41□□□□□ -1.22
CLIP1P30622 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CLIP1P30622 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 AL445487.1-201ENST00000415694 1580 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 RNA5SP479-201ENST00000364858 117 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 SNORA71.2-201ENST00000364941 134 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.41□□□□□ -1.22
CLIP1P30622 AL732292.1-201ENST00000426692 226 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC004975.1-201ENST00000428733 208 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.41□□□□□ -1.22
CLIP1P30622 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.41□□□□□ -1.22
CLIP1P30622 AC104763.1-201ENST00000475274 360 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC023424.1-201ENST00000496058 459 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.41□□□□□ -1.22
CLIP1P30622 AC068831.4-201ENST00000556118 109 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC087477.6-201ENST00000559595 843 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC005899.7-201ENST00000618199 588 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC011815.3-201ENST00000624194 473 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 MIR6830-201ENST00000636015 70 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP1P30622 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CLIP1P30622 CASC19-206ENST00000641028 1430 ntBASIC7.41□□□□□ -1.22
CLIP1P30622 AC108751.5-201ENST00000492880 1336 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
CLIP1P30622 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP1P30622 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP1P30622 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP1P30622 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP1P30622 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP1P30622 GTF2IP2-201ENST00000424290 697 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP1P30622 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP1P30622 AL162591.2-201ENST00000449634 317 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 DEFB109A-201ENST00000482450 265 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 AC020890.1-201ENST00000491837 504 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms