Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CNGA1P29973 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.51□□□□□ -1.37
CNGA1P29973 AC087516.1-201ENST00000561236 2428 ntBASIC6.51□□□□□ -1.37
CNGA1P29973 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.51□□□□□ -1.37
CNGA1P29973 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CNGA1P29973 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 AL442128.2-201ENST00000620246 1824 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CNGA1P29973 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CNGA1P29973 RN7SKP115-201ENST00000363177 317 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 RNA5SP131-201ENST00000365452 119 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CNGA1P29973 RNU6-98P-201ENST00000384173 107 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 RPL23AP17-201ENST00000401064 499 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 PCNPP4-201ENST00000414817 517 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 HIGD1AP15-201ENST00000416198 280 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 SLC35E1P1-201ENST00000419313 864 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 YWHAEP5-201ENST00000431545 765 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AL365220.1-201ENST00000432923 399 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 CYCSP6-201ENST00000434498 302 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.5□□□□□ -1.37
CNGA1P29973 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 AC104687.1-201ENST00000485829 412 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC072052.1-201ENST00000496556 306 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC090638.1-201ENST00000498296 909 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.5□□□□□ -1.37
CNGA1P29973 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.5□□□□□ -1.37
CNGA1P29973 RN7SKP288-201ENST00000516227 268 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC139365.2-201ENST00000517972 253 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 IGKV2D-10-201ENST00000520194 281 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 AL049779.2-201ENST00000553847 315 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC063977.5-201ENST00000601044 974 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AL583832.1-201ENST00000603227 784 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC093388.1-201ENST00000609166 430 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AL355974.3-201ENST00000617383 467 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AC132068.1-201ENST00000623805 459 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 AP000676.4-201ENST00000624659 623 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.5□□□□□ -1.37
CNGA1P29973 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 SAMMSON-209ENST00000641222 1100 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CNGA1P29973 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 AC130304.1-201ENST00000622942 2385 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 MFSD8-220ENST00000641243 1422 ntBASIC6.5□□□□□ -1.37
CNGA1P29973 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.5□□□□□ -1.37
CNGA1P29973 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 SMG1P7-201ENST00000565246 2704 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 RNA5SP234-201ENST00000363916 119 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 SNORA62.2-201ENST00000364672 152 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CNGA1P29973 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CNGA1P29973 RNU1-77P-201ENST00000390868 162 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 AL772161.1-201ENST00000439130 476 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AL592437.1-201ENST00000443781 492 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 ZNF886P-201ENST00000450781 723 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AC091685.2-201ENST00000454924 864 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 snoU13.29-201ENST00000459370 104 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 METTL15P1-201ENST00000481421 1045 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 RPSAP50-201ENST00000481955 852 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 AC079203.1-201ENST00000487972 404 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC111193.1-201ENST00000504097 155 ntBASIC6.49□□□□□ -1.37
CNGA1P29973 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.49□□□□□ -1.37
CNGA1P29973 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.49□□□□□ -1.37
CNGA1P29973 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms