Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 MTCO2P22-201ENST00000603246 681 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 AC074276.2-201ENST00000619891 348 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDGFRAP16234 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.32□□□□□ -1.56
PDGFRAP16234 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFRAP16234 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFRAP16234 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDGFRAP16234 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.32□□□□□ -1.56
PDGFRAP16234 AL121950.1-201ENST00000624993 2077 ntBASIC5.32□□□□□ -1.56
PDGFRAP16234 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC011755.1-201ENST00000623763 2049 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 AL589826.1-201ENST00000340697 249 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDGFRAP16234 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 SNORA58B-201ENST00000364259 136 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 MT-TP-201ENST00000387461 68 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC093162.1-201ENST00000419682 124 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 BX323845.1-201ENST00000432417 179 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 MTCYBP29-201ENST00000436327 1006 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFRAP16234 RPL7AP61-201ENST00000443410 636 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 KNOP1P3-201ENST00000446933 426 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC073850.1-201ENST00000449243 255 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 CALM1P2-201ENST00000452941 448 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC097484.1-201ENST00000471148 389 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC008410.1-201ENST00000483777 339 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 RN7SL441P-201ENST00000492388 296 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 NDUFA5P12-201ENST00000503796 343 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC108157.1-201ENST00000510511 539 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 FABP5P6-201ENST00000510588 409 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC087888.1-201ENST00000550884 1254 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 CD24P2-201ENST00000565486 219 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AC011447.4-201ENST00000587562 111 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 AP004372.1-201ENST00000604842 844 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 BX323046.1-201ENST00000610145 535 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 AC090510.2-201ENST00000617465 629 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFRAP16234 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDGFRAP16234 VPS35P1-201ENST00000563400 1518 ntBASIC5.31□□□□□ -1.56
PDGFRAP16234 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDGFRAP16234 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDGFRAP16234 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFRAP16234 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
PDGFRAP16234 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 UGT2B26P-201ENST00000508672 1613 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 SPATA2P1-201ENST00000431223 2055 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 SNORA27.3-201ENST00000364937 134 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC093716.1-201ENST00000435923 377 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 BTBD7P2-201ENST00000441962 620 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 CEACAMP7-201ENST00000444105 496 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AP002345.1-201ENST00000456493 928 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC010350.1-201ENST00000504908 231 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC034244.2-201ENST00000514668 858 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC016550.3-201ENST00000515706 767 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 RN7SKP260-201ENST00000516907 149 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms