Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC245036.1-201ENST00000391727 309 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PDGFAP04085 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 RPL5P20-201ENST00000403848 896 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 MIR1305-201ENST00000408300 86 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 SPA17P1-201ENST00000416656 452 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 PIGFP2-201ENST00000421400 651 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 LSM1P1-201ENST00000438629 273 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 CEACAMP5-201ENST00000448037 961 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 OR6K1P-201ENST00000456766 971 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 HMGN1P12-201ENST00000499125 195 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 AC018710.1-201ENST00000506509 158 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFAP04085 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFAP04085 RNA5SP473-201ENST00000516402 125 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 RN7SKP233-201ENST00000517005 110 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFAP04085 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFAP04085 AL121594.2-201ENST00000541658 472 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFAP04085 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFAP04085 AP001180.3-201ENST00000582221 145 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 AC005261.5-201ENST00000596280 355 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 NRBF2P5-201ENST00000603087 788 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 AC073091.2-201ENST00000603205 907 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 BNIP3P11-201ENST00000603878 563 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFAP04085 AL161420.1-201ENST00000619393 264 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 MIR6823-201ENST00000622118 61 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
PDGFAP04085 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 PRNCR1-201ENST00000635449 12727 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 AL021877.2-201ENST00000624442 10684 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 MAPK10-383ENST00000642032 3390 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC015871.3-201ENST00000618835 2261 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 AC005034.3-201ENST00000604845 1747 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 OR11H4-201ENST00000315409 1082 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 RNU1-149P-201ENST00000390870 161 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AL121972.1-201ENST00000402023 252 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDGFAP04085 AL356776.1-201ENST00000406574 447 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AL353133.1-201ENST00000407695 401 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 RNU2-65P-201ENST00000410162 185 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 USP9YP36-201ENST00000424581 829 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC002486.1-201ENST00000435098 391 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 MORF4-201ENST00000447135 971 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 BX322784.1-201ENST00000455793 1077 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.62□□□□□ -1.35
PDGFAP04085 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.62□□□□□ -1.35
PDGFAP04085 AC109481.1-201ENST00000509173 282 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.62□□□□□ -1.35
PDGFAP04085 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 AC108471.1-201ENST00000513977 287 ntBASIC6.62□□□□□ -1.35
PDGFAP04085 Y_RNA.693-201ENST00000516641 110 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms