Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.22□□□□□ -1.57
GPC4O75487 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GPC4O75487 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GPC4O75487 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GPC4O75487 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.21□□□□□ -1.57
GPC4O75487 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
GPC4O75487 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
GPC4O75487 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 BTBD10P1-201ENST00000549824 1352 ntBASIC5.21□□□□□ -1.58
GPC4O75487 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 AC104297.1-201ENST00000393779 870 ntBASIC5.21□□□□□ -1.58
GPC4O75487 ATP5HP3-201ENST00000396994 486 ntBASIC5.21□□□□□ -1.58
GPC4O75487 RN7SKP59-201ENST00000410520 314 ntBASIC5.21□□□□□ -1.58
GPC4O75487 NPM1P4-201ENST00000414095 812 ntBASIC5.21□□□□□ -1.58
GPC4O75487 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.21□□□□□ -1.58
GPC4O75487 RPL7L1P9-201ENST00000431298 745 ntBASIC5.21□□□□□ -1.58
GPC4O75487 BX119904.1-201ENST00000432026 348 ntBASIC5.21□□□□□ -1.58
GPC4O75487 PTP4A1P3-201ENST00000433661 420 ntBASIC5.21□□□□□ -1.58
GPC4O75487 RPS11P7-201ENST00000442125 465 ntBASIC5.21□□□□□ -1.58
GPC4O75487 CYCSP24-201ENST00000445119 316 ntBASIC5.21□□□□□ -1.58
GPC4O75487 HMGB1P5-202ENST00000451497 985 ntBASIC5.21□□□□□ -1.58
GPC4O75487 AC104634.1-201ENST00000452720 462 ntBASIC5.21□□□□□ -1.58
GPC4O75487 DNAJB5P1-201ENST00000454004 806 ntBASIC5.21□□□□□ -1.58
GPC4O75487 EIF2S2P5-201ENST00000457635 968 ntBASIC5.21□□□□□ -1.58
GPC4O75487 AP000942.1-201ENST00000463969 747 ntBASIC5.21□□□□□ -1.58
GPC4O75487 AC107015.1-201ENST00000466902 747 ntBASIC5.21□□□□□ -1.58
GPC4O75487 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.21□□□□□ -1.58
GPC4O75487 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
GPC4O75487 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 PGAM1P13-201ENST00000507497 754 ntBASIC5.21□□□□□ -1.58
GPC4O75487 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC4O75487 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC4O75487 AC113192.3-201ENST00000529152 742 ntBASIC5.21□□□□□ -1.58
GPC4O75487 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC4O75487 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.21□□□□□ -1.58
GPC4O75487 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 IMMP1LP3-201ENST00000604197 224 ntBASIC5.21□□□□□ -1.58
GPC4O75487 AL162431.4-201ENST00000604674 411 ntBASIC5.21□□□□□ -1.58
GPC4O75487 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 AC106858.1-201ENST00000637497 429 ntBASIC5.21□□□□□ -1.58
GPC4O75487 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.21□□□□□ -1.58
GPC4O75487 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.21□□□□□ -1.58
GPC4O75487 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GPC4O75487 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
GPC4O75487 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 SMG1P7-201ENST00000565246 2704 ntBASIC5.2□□□□□ -1.58
GPC4O75487 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GPC4O75487 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 RNU6-729P-201ENST00000384399 107 ntBASIC5.2□□□□□ -1.58
GPC4O75487 HSPA8P15-201ENST00000401676 786 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AL391361.1-201ENST00000405580 489 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.2□□□□□ -1.58
GPC4O75487 RNU2-22P-201ENST00000411266 212 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AC093655.2-201ENST00000425735 631 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AL512661.1-201ENST00000434586 1253 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 RNFT1P2-201ENST00000443064 757 ntBASIC5.2□□□□□ -1.58
GPC4O75487 NOP56P2-201ENST00000447491 769 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.2□□□□□ -1.58
GPC4O75487 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 OR2AF1P-201ENST00000454899 889 ntBASIC5.2□□□□□ -1.58
GPC4O75487 TPT1P1-201ENST00000458495 518 ntBASIC5.2□□□□□ -1.58
GPC4O75487 RPL7P40-201ENST00000481703 745 ntBASIC5.2□□□□□ -1.58
GPC4O75487 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 RPL7L1P4-201ENST00000513004 707 ntBASIC5.2□□□□□ -1.58
GPC4O75487 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
GPC4O75487 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC4O75487 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 AL512310.9-201ENST00000553311 948 ntBASIC5.2□□□□□ -1.58
GPC4O75487 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 AC127381.1-201ENST00000555979 939 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC4O75487 MIR6729-201ENST00000618194 65 ntBASIC5.2□□□□□ -1.58
GPC4O75487 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
GPC4O75487 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC4O75487 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC4O75487 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
GPC4O75487 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms