Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.04□□□□□ -2.08
USH2AO75445 RN7SL600P-201ENST00000581811 299 ntBASIC2.04□□□□□ -2.08
USH2AO75445 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 LDHA-225ENST00000625635 141 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.04□□□□□ -2.08
USH2AO75445 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USH2AO75445 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC2.04□□□□□ -2.08
USH2AO75445 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 PGBD4P4-201ENST00000509673 613 ntBASIC2.04□□□□□ -2.08
USH2AO75445 HMGN1P9-201ENST00000515212 298 ntBASIC2.04□□□□□ -2.08
USH2AO75445 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
USH2AO75445 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.04□□□□□ -2.08
USH2AO75445 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 CASC19-243ENST00000641588 1546 ntBASIC2.03□□□□□ -2.08
USH2AO75445 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 MR1-209ENST00000617803 7584 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 RNU6-301P-201ENST00000384277 107 ntBASIC2.03□□□□□ -2.08
USH2AO75445 RNA5SP36-201ENST00000410197 133 ntBASIC2.03□□□□□ -2.08
USH2AO75445 BRD7P6-201ENST00000431406 1860 ntBASIC2.03□□□□□ -2.08
USH2AO75445 RPL23AP52-201ENST00000439311 478 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 RNU1-6P-201ENST00000516290 144 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC079064.1-201ENST00000528365 362 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 uc_338.7-201ENST00000621834 124 ntBASIC2.03□□□□□ -2.08
USH2AO75445 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ICE2P1-201ENST00000512800 1849 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 AP000866.6-201ENST00000638898 3579 ntBASIC2.03□□□□□ -2.08
USH2AO75445 RNU6ATAC-201ENST00000408749 126 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 BTF3P10-201ENST00000433415 495 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 AC115115.1-201ENST00000449927 248 ntBASIC2.03□□□□□ -2.08
USH2AO75445 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 AC091868.1-201ENST00000508746 304 ntBASIC2.03□□□□□ -2.08
USH2AO75445 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 BUD31P1-201ENST00000521828 359 ntBASIC2.03□□□□□ -2.08
USH2AO75445 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.03□□□□□ -2.08
USH2AO75445 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.03□□□□□ -2.08
USH2AO75445 AC011816.2-201ENST00000607089 556 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC092354.2-201ENST00000607786 514 ntBASIC2.03□□□□□ -2.08
USH2AO75445 AC019206.1-201ENST00000621938 425 ntBASIC2.03□□□□□ -2.08
USH2AO75445 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USH2AO75445 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
USH2AO75445 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms