Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC124856.1-201ENST00000600819 896 ntBASIC5.34□□□□□ -1.55
O00370 AC005229.3-201ENST00000603438 323 ntBASIC5.34□□□□□ -1.55
O00370 AC013244.1-201ENST00000604279 193 ntBASIC5.34□□□□□ -1.55
O00370 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.34□□□□□ -1.55
O00370 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.34□□□□□ -1.55
O00370 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
O00370 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
O00370 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
O00370 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
O00370 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
O00370 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
O00370 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
O00370 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
O00370 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.33□□□□□ -1.56
O00370 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
O00370 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.33□□□□□ -1.56
O00370 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
O00370 AC093775.1-201ENST00000624154 1868 ntBASIC5.33□□□□□ -1.56
O00370 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
O00370 RNA5SP455-201ENST00000365190 119 ntBASIC5.33□□□□□ -1.56
O00370 RNU6-564P-201ENST00000410983 104 ntBASIC5.33□□□□□ -1.56
O00370 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 RPL36AP10-201ENST00000421785 322 ntBASIC5.33□□□□□ -1.56
O00370 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.33□□□□□ -1.56
O00370 TRIM60P13-201ENST00000432350 1283 ntBASIC5.33□□□□□ -1.56
O00370 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 BTBD7P2-201ENST00000441962 620 ntBASIC5.33□□□□□ -1.56
O00370 OR7E125P-201ENST00000443450 846 ntBASIC5.33□□□□□ -1.56
O00370 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 AC002553.2-201ENST00000453217 340 ntBASIC5.33□□□□□ -1.56
O00370 HMGB1P4-201ENST00000455362 567 ntBASIC5.33□□□□□ -1.56
O00370 RPS17P2-201ENST00000461663 408 ntBASIC5.33□□□□□ -1.56
O00370 RN7SL808P-201ENST00000496066 299 ntBASIC5.33□□□□□ -1.56
O00370 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.33□□□□□ -1.56
O00370 BTG4P1-201ENST00000510421 183 ntBASIC5.33□□□□□ -1.56
O00370 RN7SKP66-201ENST00000516681 231 ntBASIC5.33□□□□□ -1.56
O00370 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 NMNAT1P1-201ENST00000554095 876 ntBASIC5.33□□□□□ -1.56
O00370 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.33□□□□□ -1.56
O00370 AL445222.1-201ENST00000607259 628 ntBASIC5.33□□□□□ -1.56
O00370 AL121890.2-201ENST00000617644 465 ntBASIC5.33□□□□□ -1.56
O00370 AC020763.5-201ENST00000623298 430 ntBASIC5.33□□□□□ -1.56
O00370 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.33□□□□□ -1.56
O00370 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.33□□□□□ -1.56
O00370 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.33□□□□□ -1.56
O00370 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
O00370 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.33□□□□□ -1.56
O00370 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
O00370 HSPA8P18-201ENST00000439846 1928 ntBASIC5.33□□□□□ -1.56
O00370 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
O00370 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.32□□□□□ -1.56
O00370 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
O00370 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
O00370 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 AC133552.1-201ENST00000569988 4007 ntBASIC5.32□□□□□ -1.56
O00370 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
O00370 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.32□□□□□ -1.56
O00370 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 RNU4-4P-201ENST00000364588 130 ntBASIC5.32□□□□□ -1.56
O00370 RNA5SP428-201ENST00000365129 132 ntBASIC5.32□□□□□ -1.56
O00370 LRRC37BP1-201ENST00000398851 714 ntBASIC5.32□□□□□ -1.56
O00370 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.32□□□□□ -1.56
O00370 AL607077.1-201ENST00000401718 499 ntBASIC5.32□□□□□ -1.56
O00370 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.32□□□□□ -1.56
O00370 GJA6P-201ENST00000415117 1042 ntBASIC5.32□□□□□ -1.56
O00370 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.32□□□□□ -1.56
O00370 RCC2P2-201ENST00000422174 918 ntBASIC5.32□□□□□ -1.56
O00370 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.32□□□□□ -1.56
O00370 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.32□□□□□ -1.56
O00370 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.32□□□□□ -1.56
O00370 AL691482.1-201ENST00000453255 87 ntBASIC5.32□□□□□ -1.56
O00370 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.32□□□□□ -1.56
O00370 RN7SL515P-201ENST00000463999 297 ntBASIC5.32□□□□□ -1.56
O00370 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.32□□□□□ -1.56
O00370 RPL37AP8-201ENST00000494116 276 ntBASIC5.32□□□□□ -1.56
O00370 RN7SKP147-201ENST00000517154 244 ntBASIC5.32□□□□□ -1.56
O00370 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.32□□□□□ -1.56
O00370 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.32□□□□□ -1.56
O00370 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.32□□□□□ -1.56
O00370 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 AC016180.1-201ENST00000567945 403 ntBASIC5.32□□□□□ -1.56
O00370 AC087763.1-201ENST00000603391 286 ntBASIC5.32□□□□□ -1.56
O00370 MEMO1P5-201ENST00000604810 406 ntBASIC5.32□□□□□ -1.56
O00370 KATNBL1P1-201ENST00000605192 748 ntBASIC5.32□□□□□ -1.56
O00370 AP002799.1-201ENST00000623552 423 ntBASIC5.32□□□□□ -1.56
O00370 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 AC019072.1-201ENST00000604535 1551 ntBASIC5.32□□□□□ -1.56
O00370 SCARNA15-201ENST00000607520 4325 ntBASIC5.32□□□□□ -1.56
O00370 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
O00370 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms