Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 ELOCP28-201ENST00000590044 317 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 FAM60CP-201ENST00000591086 664 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 AC009597.2-201ENST00000604659 592 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM1O00151 AC022467.1-201ENST00000614738 749 ntBASIC4.85□□□□□ -1.63
PDLIM1O00151 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM1O00151 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM1O00151 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM1O00151 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PDLIM1O00151 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM1O00151 RNA5SP319-201ENST00000362768 119 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM1O00151 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM1O00151 CLUHP1-201ENST00000435012 1190 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 SPRYD7P1-201ENST00000443861 570 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM1O00151 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.84□□□□□ -1.63
PDLIM1O00151 RN7SL547P-201ENST00000490793 290 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC025445.1-201ENST00000502728 300 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC083829.1-201ENST00000503756 657 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM1O00151 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM1O00151 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
PDLIM1O00151 RNA5SP497-201ENST00000516081 97 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PDLIM1O00151 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.84□□□□□ -1.63
PDLIM1O00151 AC078878.1-201ENST00000539832 958 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM1O00151 AC068790.5-201ENST00000602741 355 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 SUGT1P3-202ENST00000604259 383 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC079395.2-201ENST00000610982 737 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC109309.2-201ENST00000612597 332 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC020658.4-201ENST00000613987 684 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AL359513.1-201ENST00000614364 557 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM1O00151 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PDLIM1O00151 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.84□□□□□ -1.63
PDLIM1O00151 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM1O00151 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDLIM1O00151 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDLIM1O00151 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.84□□□□□ -1.64
PDLIM1O00151 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PDLIM1O00151 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM1O00151 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM1O00151 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 SNORA51.1-201ENST00000363243 140 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 SNORD96B-201ENST00000386148 79 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL391361.1-201ENST00000405580 489 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL390316.1-201ENST00000406279 553 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL603766.1-201ENST00000407763 664 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 RNA5SP104-201ENST00000410989 118 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 CEACAMP8-201ENST00000413902 580 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM1O00151 TMBIM7P-201ENST00000418074 855 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AJ239321.1-201ENST00000424255 564 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM1O00151 GSTM5P1-201ENST00000434751 660 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM1O00151 Z80107.2-201ENST00000445127 392 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL672138.1-201ENST00000450604 1015 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 RN7SL517P-201ENST00000462240 305 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 RN7SL423P-201ENST00000486202 304 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 AC073073.1-201ENST00000493920 463 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM1O00151 RPL7L1P4-201ENST00000513004 707 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 RNA5SP249-201ENST00000516127 99 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 SCARNA16.4-201ENST00000516956 187 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM1O00151 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM1O00151 AC009268.1-201ENST00000561352 1203 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM1O00151 MTND2P13-201ENST00000577438 1039 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 AC020915.5-201ENST00000596836 964 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AL139395.1-201ENST00000603662 160 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AC000068.2-201ENST00000608816 460 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 AC078899.5-201ENST00000612475 178 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.83□□□□□ -1.64
PDLIM1O00151 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM1O00151 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM1O00151 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms