Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 AC069307.1-201ENST00000602820 447 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AC100767.2-201ENST00000604840 693 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AC087783.2-201ENST00000605070 562 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 IMMP1LP1-201ENST00000605170 488 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 AL162574.2-201ENST00000614618 657 ntBASIC5.2□□□□□ -1.58
CCDC188H7C350 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC188H7C350 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC188H7C350 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC188H7C350 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 RN7SKP124-201ENST00000364730 341 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 RNU6-40P-201ENST00000384254 107 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 MIR600-201ENST00000385007 98 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 RNU1-77P-201ENST00000390868 162 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 BX323845.1-201ENST00000432417 179 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AC012075.1-201ENST00000436549 580 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC188H7C350 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 AL157827.1-201ENST00000447622 132 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 OTX2P1-201ENST00000450956 354 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC094085.1-201ENST00000468914 584 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AP003168.1-201ENST00000530091 307 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AC134349.2-201ENST00000535136 910 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AC126177.5-201ENST00000549599 178 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 RN7SL753P-201ENST00000581238 290 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CCDC188H7C350 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC009643.2-201ENST00000603543 1448 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 AC091305.2-201ENST00000624049 1576 ntBASIC5.19□□□□□ -1.58
CCDC188H7C350 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC188H7C350 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC188H7C350 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 TTC39DP-201ENST00000416781 1688 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 HSPA8P17-201ENST00000427029 1382 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 RNA5SP435-201ENST00000364044 108 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 RANP4-201ENST00000413361 655 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 RPA2P2-201ENST00000419698 796 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 FAR1P1-201ENST00000427163 934 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC188H7C350 MTCYBP12-201ENST00000440559 1134 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC022431.1-201ENST00000450941 438 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AC018638.3-201ENST00000461273 132 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 NPM1P29-201ENST00000483112 803 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC188H7C350 Y_RNA.719-201ENST00000517156 106 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AC026688.1-201ENST00000520639 1168 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC188H7C350 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC027243.2-201ENST00000602530 724 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 SUGT1P3-202ENST00000604259 383 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AC034236.3-201ENST00000605999 461 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 CR589904.2-201ENST00000612533 440 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC188H7C350 AC090527.3-201ENST00000619041 548 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 AL691477.1-201ENST00000624398 162 ntBASIC5.18□□□□□ -1.58
CCDC188H7C350 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms