Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 U8.4-201ENST00000363626 134 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 MIR137-201ENST00000385223 102 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC01347-201ENST00000417964 355 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 RPL12P17-201ENST00000432393 498 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC000041.1-201ENST00000439655 175 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 EXOSC3P1-201ENST00000448649 500 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 SBDSP1-204ENST00000453858 737 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 RN7SL329P-201ENST00000467740 299 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC109464.1-201ENST00000511091 819 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 GAPDHP62-201ENST00000515313 990 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AP001207.2-201ENST00000519490 539 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AP004607.2-201ENST00000533949 322 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 CYB5AP5-201ENST00000549779 389 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AL109741.3-201ENST00000561748 592 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 MTCO2P2-201ENST00000591258 225 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC093673.2-201ENST00000609674 331 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC004948.1-201ENST00000609858 672 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC109809.1-201ENST00000619665 545 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AL669942.2-201ENST00000620352 697 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC010435.1-201ENST00000623353 1177 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC097520.1-201ENST00000624435 385 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC132825.7-201ENST00000638744 335 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AC053481.2-202ENST00000582394 1500 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AL353796.1-201ENST00000561542 3241 ntBASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.41□□□□□ -1.54
TBC1D3FA6NER0 AL132640.2-201ENST00000559968 1698 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 U3.10-201ENST00000364459 214 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 GAPDHP15-201ENST00000398586 975 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 OR4K12P-201ENST00000406538 961 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 DUTP5-201ENST00000406790 469 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 RNA5SP487-201ENST00000410186 122 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 MTCO3P4-201ENST00000419236 787 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC092754.1-201ENST00000472975 479 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 RPL7AP6-201ENST00000477943 801 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 RPL7P40-201ENST00000481703 745 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 SNRPCP2-201ENST00000504370 475 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 HPRT1P1-201ENST00000509498 657 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 RNU6-276P-201ENST00000516114 96 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC034205.1-201ENST00000520621 638 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 BNIP3P32-201ENST00000600015 554 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC018618.2-201ENST00000604770 446 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC079610.2-201ENST00000604818 690 ntBASIC5.4□□□□□ -1.54
TBC1D3FA6NER0 AC112220.2-201ENST00000605513 533 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms