Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA6Q9Y5G7 AL731532.1-201ENST00000623972 4236 ntBASIC5.79□□□□□ -1.48
PCDHGA6Q9Y5G7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 HMGB1P5-201ENST00000255320 642 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 OR52B3P-201ENST00000314715 928 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SNORA51.1-201ENST00000363243 140 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 RN7SKP292-201ENST00000365522 317 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 OR1L1-202ENST00000373686 1083 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 RNU6-83P-201ENST00000384568 112 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 MTND2P18-201ENST00000419962 1030 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC048351.1-201ENST00000420064 602 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL035660.1-201ENST00000422041 222 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 KATNBL1P3-201ENST00000443475 909 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SEPT7P3-201ENST00000455017 621 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC084024.2-201ENST00000503480 791 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC010486.2-201ENST00000505572 483 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 IGBP1P5-201ENST00000507524 1000 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC010486.3-201ENST00000511602 785 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 RNU6-416P-201ENST00000516265 103 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 Y_RNA.688-201ENST00000516565 95 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SCARNA21.2-201ENST00000516600 166 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 GCSHP4-201ENST00000538792 439 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL392112.1-201ENST00000605115 829 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL139344.1-201ENST00000605228 195 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC010245.2-201ENST00000606908 1167 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AP005137.2-201ENST00000609238 400 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC109309.2-201ENST00000612597 332 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AL158163.2-201ENST00000619110 700 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC131159.1-201ENST00000621854 213 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 CDRT1-208ENST00000630868 794 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 TTC39DP-201ENST00000416781 1688 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AC015799.1-201ENST00000622996 3122 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 HSPA8P17-201ENST00000427029 1382 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 AP005901.5-201ENST00000545779 1796 ntBASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA6Q9Y5G7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.77□□□□□ -1.48
PCDHGA6Q9Y5G7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.77□□□□□ -1.48
PCDHGA6Q9Y5G7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 MIR323A-201ENST00000362199 86 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 MIR433-201ENST00000384837 93 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 SFR1P1-201ENST00000403720 688 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 MIR1203-201ENST00000408812 85 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 AC007435.1-201ENST00000421086 415 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 DPRXP1-201ENST00000426312 460 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 TXNL1P1-201ENST00000429528 554 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 USP9YP31-201ENST00000431405 881 ntBASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHGA6Q9Y5G7 UBE2V1P5-201ENST00000440070 405 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms