Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 OR5H15-201ENST00000383696 930 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 MTCO1P56-201ENST00000401674 224 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPS7P9-201ENST00000414704 586 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPL12P3-201ENST00000440080 396 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CNOT7P2-201ENST00000441051 832 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC097262.1-201ENST00000452559 548 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPL7P32-201ENST00000457119 744 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC002075.1-201ENST00000457396 676 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPL35AP19-201ENST00000469425 329 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AL355032.1-201ENST00000472981 438 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPS17P15-201ENST00000475609 349 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC022215.1-201ENST00000481770 362 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 OR7E157P-201ENST00000494376 911 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 FTH1P8-201ENST00000498161 514 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC023050.1-201ENST00000498198 304 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CDH12P4-201ENST00000517835 295 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CDH12P3-201ENST00000517935 295 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CDH12P1-201ENST00000518435 295 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC020937.1-201ENST00000519677 1013 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 HMGB1P42-201ENST00000532126 553 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 ELOCP32-201ENST00000548625 324 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 HAUS8P1-201ENST00000549005 542 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC022662.1-201ENST00000580252 331 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC090616.2-202ENST00000584248 222 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AP002906.1-201ENST00000603405 233 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC010738.1-201ENST00000604970 987 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 Mico1.1-201ENST00000611698 204 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 RPSAP73-201ENST00000614820 330 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AL162574.1-201ENST00000615702 950 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AL121890.3-201ENST00000618494 516 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 HSPD1P8-201ENST00000400121 1658 ntBASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDLIM7Q9NR12 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 UGT2B24P-201ENST00000514441 1597 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RNA5SP507-201ENST00000363603 121 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RNU6-932P-201ENST00000391108 106 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL133270.1-201ENST00000402635 279 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RN7SKP125-201ENST00000410481 302 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RPL23AP27-201ENST00000415161 451 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 C1DP1-201ENST00000426049 402 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL139148.1-201ENST00000427122 680 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC124944.2-201ENST00000429866 1242 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 MOB1AP1-201ENST00000430903 535 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC233982.1-201ENST00000451247 436 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC239798.3-201ENST00000454459 408 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms