Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 MIR372-201ENST00000362225 67 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 SNORD1C-201ENST00000363315 78 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 RNU6-628P-201ENST00000410675 107 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AL450992.3-201ENST00000413192 568 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 PAICSP4-201ENST00000517543 1253 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AC010476.1-201ENST00000519111 851 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 PSMB7P1-201ENST00000556349 514 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 RN7SL703P-201ENST00000578485 302 ntBASIC4.51□□□□□ -1.69
CHD8Q9HCK8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.51□□□□□ -1.69
CHD8Q9HCK8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC239868.2-201ENST00000564237 4527 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 SNORA2.3-201ENST00000383920 135 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 EIF4A1P3-201ENST00000411521 244 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC110768.1-201ENST00000509222 400 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 SNORD91A-202ENST00000609620 191 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 MIR8059-201ENST00000620427 81 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC002525.1-201ENST00000624392 1622 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AL121977.1-201ENST00000401636 979 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AL122016.1-201ENST00000403365 367 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 PPIAP9-201ENST00000403866 498 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 AL035246.1-201ENST00000433554 1255 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 TPT1P3-201ENST00000492841 512 ntBASIC4.5□□□□□ -1.69
CHD8Q9HCK8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHD8Q9HCK8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AL356387.2-201ENST00000422272 243 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 FTH1P24-201ENST00000503502 462 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AC130364.2-201ENST00000528639 604 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AP005019.3-201ENST00000620418 560 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AC092451.3-201ENST00000625067 1343 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 NACA3P-201ENST00000359690 648 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 APOOP2-201ENST00000461561 539 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AC079804.1-201ENST00000461922 436 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 OR2A3P-201ENST00000493774 953 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 SLC25A14P1-201ENST00000502867 901 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 AL121932.1-201ENST00000605542 214 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 SNORA51-201ENST00000606420 132 ntBASIC4.49□□□□□ -1.69
CHD8Q9HCK8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms