Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC021146.7-201ENST00000509604 775 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC006499.4-201ENST00000510947 694 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP464-201ENST00000516251 108 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 TRIM77BP-201ENST00000524985 1119 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR4V1P-201ENST00000525394 1140 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC005868.1-201ENST00000536421 331 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC092868.3-201ENST00000560515 784 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC009268.1-201ENST00000561352 1203 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 ARGFXP2-201ENST00000579304 949 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AP001542.1-201ENST00000591314 200 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC079315.1-201ENST00000602952 623 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AL034370.1-201ENST00000397254 1590 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC011155.1-201ENST00000316512 456 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP319-201ENST00000362768 119 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP90-201ENST00000364801 99 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 GSTA12P-201ENST00000402398 508 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 EEF1B2P8-201ENST00000414101 671 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 OR6E1P-201ENST00000414424 923 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 TNPO1P1-201ENST00000423641 1138 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RPS20P1-201ENST00000434853 354 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 TPTE2P1-204ENST00000435256 593 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 MAPRE1P3-201ENST00000435438 796 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RPS26P2-201ENST00000440331 348 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RPL7AP61-201ENST00000443410 636 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 OTX2P1-201ENST00000450956 354 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC073476.1-201ENST00000452854 407 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 ARL4AP1-201ENST00000503220 705 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC012400.1-201ENST00000518452 381 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 TRAV11-201ENST00000539512 339 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 BLZF2P-201ENST00000553776 1130 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RBM22P1-201ENST00000578589 1214 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RN7SL52P-201ENST00000584271 284 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC067773.1-201ENST00000603284 1094 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AL359091.2-201ENST00000609303 556 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 RN7SL787P-201ENST00000613000 284 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 AC074101.1-201ENST00000637861 241 ntBASIC3.35□□□□□ -1.87
SND1-IT1Q9HBX3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms