Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 HCG18-244ENST00000602516 2890 ntBASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SCAF1Q9H7N4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 Y_RNA.83-201ENST00000363005 113 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC093392.1-201ENST00000366280 340 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 MIR454-201ENST00000390180 115 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 RPSAP44-201ENST00000406712 884 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 MIR1298-201ENST00000408783 112 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AL138479.1-201ENST00000426913 484 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 SNAP23P1-201ENST00000433229 246 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 RPL23AP89-201ENST00000439324 255 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 FTH1P7-201ENST00000450676 552 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC019080.2-201ENST00000453859 394 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC079944.1-201ENST00000485426 495 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 RNU6-189P-201ENST00000516120 101 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 GZMB-205ENST00000526004 819 ntTSL 3 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AP003733.2-201ENST00000529409 171 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC015818.6-201ENST00000584274 634 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC011921.3-201ENST00000605540 361 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC106782.7-201ENST00000624024 418 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC133555.5-201ENST00000624430 418 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 RAD17P2-201ENST00000451754 1977 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 ZNF72P-201ENST00000425869 1908 ntBASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SCAF1Q9H7N4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 Y_RNA.54-201ENST00000362766 105 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 Y_RNA.269-201ENST00000364685 89 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RPL7-203ENST00000396466 762 ntTSL 3 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL136968.2-201ENST00000407959 354 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RPS10P21-201ENST00000430654 475 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RPS29P16-201ENST00000452798 171 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RPS20P32-201ENST00000456044 356 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL049714.1-201ENST00000466686 347 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 TRBV8-2-201ENST00000475637 270 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RN7SL282P-201ENST00000479676 297 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RN7SL403P-201ENST00000481783 305 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 DTNA-220ENST00000590831 847 ntTSL 2 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC011891.2-201ENST00000604949 397 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL136985.2-201ENST00000607372 535 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC010424.2-201ENST00000607594 443 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 OR6R2P-201ENST00000609216 300 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AL138726.1-201ENST00000614873 333 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 RN7SL113P-201ENST00000619959 299 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC026108.1-201ENST00000635444 547 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 HLA-B-258ENST00000640615 240 ntBASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SCAF1Q9H7N4 GTF2H2B-203ENST00000508065 1432 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms