Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC007382.1-201ENST00000624376 2618 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AL133243.3-201ENST00000617415 3004 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 RNU1-32P-201ENST00000363937 159 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM4Q9C037 SNORA67-201ENST00000384423 137 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 MIR551A-201ENST00000385042 96 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 U3.36-201ENST00000408418 213 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 E2F6P2-201ENST00000420708 748 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 RPL23AP37-201ENST00000479658 549 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AL161747.1-201ENST00000480068 358 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC109464.1-201ENST00000511091 819 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 PCNPP1-201ENST00000552501 511 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC063949.1-201ENST00000552900 865 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC124856.1-201ENST00000600819 896 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC083809.1-201ENST00000615051 472 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC131238.1-201ENST00000617135 328 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC016717.3-201ENST00000624730 554 ntBASIC5.09□□□□□ -1.59
TRIM4Q9C037 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM4Q9C037 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM4Q9C037 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.09□□□□□ -1.6
TRIM4Q9C037 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.09□□□□□ -1.6
TRIM4Q9C037 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 RNA5SP123-201ENST00000363244 119 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 RPS16P5-201ENST00000406501 404 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 EIF4A1P1-201ENST00000420241 934 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC092324.1-201ENST00000468671 324 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC090114.3-201ENST00000479267 829 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 SLC25A15P5-201ENST00000508033 253 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AL358913.1-201ENST00000554342 121 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC244517.3-201ENST00000616254 1235 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 AL158196.1-201ENST00000616786 434 ntBASIC5.08□□□□□ -1.6
TRIM4Q9C037 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM4Q9C037 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM4Q9C037 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 SNORA68.2-201ENST00000391263 128 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AL121834.1-202ENST00000404494 277 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC239367.2-201ENST00000447309 705 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 NOP56P2-201ENST00000447491 769 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 CYCSP34-201ENST00000458172 304 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC058823.1-201ENST00000485315 474 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 OR9N1P-201ENST00000491296 333 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms