Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC005261.2-201ENST00000593427 4258 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 Y_RNA.452-201ENST00000384202 108 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 Y_RNA.618-201ENST00000410949 107 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL672212.1-201ENST00000422246 400 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 PMS2P9-201ENST00000441237 515 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 MGAT2P1-201ENST00000449718 797 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 PPIAP20-201ENST00000449839 135 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 PMS2P11-201ENST00000451831 574 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 MED28P8-201ENST00000454831 521 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC010878.1-201ENST00000456500 1047 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AP1S2P1-201ENST00000457344 379 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 RPL32P9-201ENST00000487963 407 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 RN7SL350P-201ENST00000492591 299 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 TMEM251P1-201ENST00000503717 318 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 HMGB3P15-201ENST00000507326 574 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 CHCHD2P7-201ENST00000508008 452 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 NACAP6-201ENST00000509572 622 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC090572.1-201ENST00000519251 160 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC022616.3-201ENST00000523940 148 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC087257.2-201ENST00000538759 928 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC123904.2-201ENST00000548059 300 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 DNAJC8P1-201ENST00000554535 372 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 MIR3118-1-201ENST00000581787 76 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC098848.2-201ENST00000588023 330 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL358335.3-201ENST00000604678 327 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL096855.2-201ENST00000605785 369 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC019193.3-201ENST00000609144 554 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC073593.1-201ENST00000624500 411 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC012557.3-201ENST00000626439 255 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC073488.7-201ENST00000633785 778 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL031595.3-201ENST00000624919 14262 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 AC102941.1-201ENST00000567616 1537 ntBASIC7.72□□□□□ -1.17
PHOX2BQ99453 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHOX2BQ99453 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.72□□□□□ -1.17
PHOX2BQ99453 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PHOX2BQ99453 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.17
PHOX2BQ99453 AL133243.4-201ENST00000623116 3109 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
PHOX2BQ99453 RNU1-65P-201ENST00000363919 148 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 Y_RNA.231-201ENST00000364358 102 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 SNORA22B-201ENST00000383876 138 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 RNU6-1013P-201ENST00000384180 107 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.71□□□□□ -1.18
PHOX2BQ99453 USP24P1-201ENST00000433802 779 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 AC234771.4-201ENST00000441416 730 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 DBIL5P2-201ENST00000443827 253 ntBASIC7.71□□□□□ -1.18
PHOX2BQ99453 AL845321.1-201ENST00000444603 348 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms