Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 XKRY-201ENST00000510392 1100 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC021678.3-201ENST00000517893 476 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 HMGB1P42-201ENST00000532126 553 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC023050.2-201ENST00000544968 387 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC126615.2-201ENST00000553003 515 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC131235.4-201ENST00000609288 620 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 AC010608.2-201ENST00000624830 470 ntBASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDK5RAP1Q96SZ6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01963-201ENST00000562038 3148 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 GTF2IP4-201ENST00000453092 2054 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RN7SKP69-201ENST00000365390 305 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RN7SKP269-201ENST00000365545 319 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RNY3P14-201ENST00000384309 102 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 MIR143-201ENST00000385300 106 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU11-201ENST00000387069 134 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RPL11P3-201ENST00000395256 523 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 HMGB1P20-201ENST00000402555 677 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL663109.1-201ENST00000411498 844 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL357752.1-201ENST00000412817 349 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL445183.3-201ENST00000414168 502 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 HMGB3P24-201ENST00000433260 622 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AP000936.2-201ENST00000447151 681 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 OR7E116P-201ENST00000448529 957 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 MEMO1P4-201ENST00000453590 386 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RPS23P2-201ENST00000463671 415 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 CYCSP20-201ENST00000473154 315 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC006539.1-201ENST00000481419 501 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 SUMO2P4-201ENST00000504193 276 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU6-615P-201ENST00000516065 106 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 OR7E10P-201ENST00000526420 991 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AP000619.2-201ENST00000546014 969 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL512310.9-201ENST00000553311 948 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 SETP1-201ENST00000556014 845 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC011445.2-201ENST00000599274 173 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL360012.1-201ENST00000602813 131 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL354976.1-201ENST00000613843 387 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC091931.1-201ENST00000623488 728 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AC007494.3-201ENST00000624660 743 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 AL355480.1-201ENST00000629041 99 ntBASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CDK5RAP1Q96SZ6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005725.1-201ENST00000577346 2607 ntBASIC6.01□□□□□ -1.45
CDK5RAP1Q96SZ6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms