Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC092953.2-201ENST00000608000 699 ntBASIC5.31□□□□□ -1.56
SEMA4DQ92854 AC074276.2-201ENST00000619891 348 ntBASIC5.31□□□□□ -1.56
SEMA4DQ92854 AC020978.9-201ENST00000624380 1141 ntBASIC5.31□□□□□ -1.56
SEMA4DQ92854 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.31□□□□□ -1.56
SEMA4DQ92854 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.31□□□□□ -1.56
SEMA4DQ92854 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEMA4DQ92854 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEMA4DQ92854 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SEMA4DQ92854 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEMA4DQ92854 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.31□□□□□ -1.56
SEMA4DQ92854 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEMA4DQ92854 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEMA4DQ92854 CDC27P2-201ENST00000425026 1922 ntBASIC5.31□□□□□ -1.56
SEMA4DQ92854 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 SCARNA15-201ENST00000607520 4325 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 CCNB2P1-201ENST00000399411 1150 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AL356968.2-201ENST00000412769 1257 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AL357078.2-201ENST00000416486 427 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC093414.1-201ENST00000434712 514 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 PTMAP6-201ENST00000439110 327 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 Z99127.2-201ENST00000441426 334 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 TRY2P-201ENST00000448860 689 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AL353718.1-201ENST00000451028 517 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 CYCSP53-201ENST00000455540 265 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 snoU13.20-201ENST00000459180 104 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 RN7SL97P-201ENST00000486780 299 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 NPM1P28-201ENST00000492269 840 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC140172.1-201ENST00000502928 141 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AK4P6-201ENST00000505168 528 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 MORF4L1P3-201ENST00000525966 950 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 OR5AZ1P-201ENST00000527448 943 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 OR4H6P-202ENST00000603819 340 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC080188.3-201ENST00000624842 748 ntBASIC5.3□□□□□ -1.56
SEMA4DQ92854 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SEMA4DQ92854 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEMA4DQ92854 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEMA4DQ92854 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 RNA5SP345-201ENST00000410646 108 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 CHEK2P3-201ENST00000416118 248 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC074367.1-201ENST00000438685 1125 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 ARL5AP3-201ENST00000439327 386 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC004453.1-201ENST00000487895 408 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 PCNAP1-201ENST00000505363 709 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL049830.4-201ENST00000555149 351 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC016180.1-201ENST00000567945 403 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 AC037198.3-201ENST00000616754 526 ntBASIC5.29□□□□□ -1.56
SEMA4DQ92854 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.29□□□□□ -1.56
SEMA4DQ92854 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms