Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC005377.1-201ENST00000605126 456 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 COX6CP4-201ENST00000605798 228 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AP005212.4-201ENST00000614206 710 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC007204.2-201ENST00000615022 616 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 DDX18P4-201ENST00000511690 1966 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 CASC19-281ENST00000642118 1554 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUDCD3Q8IVD9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RNU1-43P-201ENST00000365052 165 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RNU6-1263P-201ENST00000384601 106 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 MIR195-201ENST00000385194 87 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AL031985.1-201ENST00000392713 418 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AL357515.1-201ENST00000402967 542 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AL080315.1-201ENST00000406055 466 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RNA5SP178-201ENST00000410380 128 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC098592.2-201ENST00000413158 265 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 OR7E125P-201ENST00000443450 846 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC007386.1-201ENST00000455212 582 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 ARL4AP1-201ENST00000503220 705 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC011411.1-201ENST00000509592 876 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RN7SKP260-201ENST00000516907 149 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 CD24P2-201ENST00000565486 219 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC122134.1-201ENST00000565664 1104 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 TVP23CP2-201ENST00000571473 623 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AP005901.4-201ENST00000577336 569 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 uc_338.18-201ENST00000615451 175 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 AC008758.3-201ENST00000507003 1829 ntBASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUDCD3Q8IVD9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 HSPA8P17-201ENST00000427029 1382 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 SNORA17.1-201ENST00000362945 126 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 RN7SKP126-201ENST00000411143 300 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC079807.1-201ENST00000429993 481 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL451139.1-201ENST00000434718 346 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 ARL4AP3-201ENST00000441452 574 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC000111.2-201ENST00000448200 210 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 MTCYBP14-201ENST00000457471 715 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL133372.1-201ENST00000493565 745 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC021146.3-201ENST00000511911 260 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 MTATP6P1-201ENST00000514057 681 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 SNORD116-30-201ENST00000516468 85 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 OR4A46P-201ENST00000527255 933 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 RPL21P7-201ENST00000557463 483 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 AL137072.1-201ENST00000603444 466 ntBASIC4.79□□□□□ -1.64
NUDCD3Q8IVD9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms