Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR3662-201ENST00000637030 95 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 IFIT1P1-201ENST00000400497 1449 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AP002370.1-201ENST00000528055 1602 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RNA5SP333-201ENST00000363466 118 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RNA5SP334-201ENST00000364825 118 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.296-201ENST00000364930 108 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RNU6-738P-201ENST00000384531 106 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SNORA40.3-201ENST00000390964 122 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC121334.1-201ENST00000396414 802 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL353133.1-201ENST00000407695 401 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RNU6-248P-201ENST00000410720 107 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RN7SKP205-201ENST00000410999 307 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AIMP1P1-201ENST00000418670 937 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC092647.1-201ENST00000420654 287 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 PTPN2P1-201ENST00000423212 1072 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC108059.2-201ENST00000434626 151 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RPS25P9-201ENST00000435591 252 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 FMO7P-201ENST00000436045 768 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SNRPBP1-201ENST00000443634 282 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 PDSS1P2-201ENST00000449397 678 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC092757.1-201ENST00000467293 467 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RPS3AP49-201ENST00000472161 790 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RPS29P25-201ENST00000481709 171 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC023818.1-201ENST00000498379 384 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC093878.1-201ENST00000515630 432 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SNORA31.13-201ENST00000516624 135 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC005832.3-201ENST00000537929 631 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL355836.1-201ENST00000555951 870 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 HMGB1P33-201ENST00000563485 527 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ANP32BP1-202ENST00000568553 737 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AP003115.1-201ENST00000569849 463 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR7A8P-201ENST00000595427 913 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AL157899.1-201ENST00000604110 936 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC018692.2-201ENST00000624130 348 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR5M2P-202ENST00000641241 4242 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC079097.1-201ENST00000512187 1399 ntBASIC6.04□□□□□ -1.44
ATG4DQ86TL0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.04□□□□□ -1.44
ATG4DQ86TL0 AC073055.1-201ENST00000456901 1621 ntBASIC6.03□□□□□ -1.44
ATG4DQ86TL0 AC066616.2-201ENST00000559334 1481 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms