Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC074101.1-201ENST00000637861 241 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NUP54Q7Z3B4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP54Q7Z3B4 AC100757.1-201ENST00000616872 1835 ntBASIC5□□□□□ -1.61
NUP54Q7Z3B4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 Z95327.2-201ENST00000414579 1873 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RN7SKP162-201ENST00000363605 345 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RNA5SP335-201ENST00000363817 110 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 OR13Z1P-201ENST00000416141 834 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC073508.1-201ENST00000428866 656 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 HSPD1P12-201ENST00000429127 1069 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 GSTM5P1-201ENST00000434751 660 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 CYCSP53-201ENST00000455540 265 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 OR2AO1P-201ENST00000476497 403 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RPL7P39-201ENST00000481157 744 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 NIP7P2-201ENST00000485801 544 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RNU6-1004P-201ENST00000516584 111 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 NPM1P6-201ENST00000521088 871 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 RN7SL753P-201ENST00000581238 290 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 MIR3176-201ENST00000582210 90 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC005242.1-201ENST00000585658 438 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AL450270.1-201ENST00000606160 391 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 AC009318.3-201ENST00000616916 503 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 ADAM24P-201ENST00000398655 2101 ntBASIC4.99□□□□□ -1.61
NUP54Q7Z3B4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AP001002.1-201ENST00000625148 1513 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SNORA16A-201ENST00000384342 137 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 PPIAP9-201ENST00000403866 498 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC105402.1-201ENST00000413336 545 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 NPM1P4-201ENST00000414095 812 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AL133325.1-201ENST00000421090 382 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 VTI1BP4-201ENST00000427516 527 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 NPM1P24-201ENST00000428039 894 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 RPL7AP49-201ENST00000429522 581 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AL591438.1-201ENST00000433508 581 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SUMO2P1-206ENST00000445436 284 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms